RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 LGR5O75473 907 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 ZNF202O95125 648 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 AKR1A1P14550 325 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 SFNP31947 248 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 SYKP43405 635 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
CHD3-210ENST00000479080 KLHL40Q2TBA0 621 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 COL13A1Q5TAT6 717 aaPredicted RBP14.7□□□□□ -0.06
CHD3-210ENST00000479080 CCDC73Q6ZRK6 1079 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 SH3RF1Q7Z6J0 888 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 TLK2Q86UE8 772 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 GIMAP8Q8ND71 665 aaPredicted RBP14.7□□□□□ -0.06
CHD3-210ENST00000479080 OR6J1Q8NGC5 347 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 SPATA33Q96N06 139 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 LXNQ9BS40 222 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 UPF3AQ9H1J1 476 aaKnown RBP14.7□□□□□ -0.06
CHD3-210ENST00000479080 MLXIPQ9HAP2 919 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 TUFT1Q9NNX1 390 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 DDX19AQ9NUU7 478 aaKnown RBP14.7□□□□□ -0.06
CHD3-210ENST00000479080 FAM184BQ9ULE4 1060 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 PCDHA10Q9Y5I2 948 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 SYNRGQ9UMZ2 1314 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 DYNC1LI2O43237 492 aaPredicted RBP14.69□□□□□ -0.06
CHD3-210ENST00000479080 SLC26A4O43511 780 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 TRAK2O60296 914 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 ADAMTS4O75173 837 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 LYPLA2O95372 231 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 MBD3O95983 291 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 P4HBP07237 508 aaKnown RBP14.69□□□□□ -0.06
CHD3-210ENST00000479080 MMP3P08254 477 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 TCF7P36402 384 aaPredicted RBP14.69□□□□□ -0.06
CHD3-210ENST00000479080 NKX3-2P78367 333 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 LAMC2Q13753 1193 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 ARHGEF6Q15052 776 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 ZRSR1Q15695 479 aaKnown RBP14.69□□□□□ -0.06
CHD3-210ENST00000479080 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 SWSAP1Q6NVH7 229 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 KRBA2Q6ZNG9 492 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 CTU1Q7Z7A3 348 aaKnown RBP14.69□□□□□ -0.06
CHD3-210ENST00000479080 PPTC7Q8NI37 304 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 NEK9Q8TD19 979 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 AFAP1L1Q8TED9 768 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 SEPT1Q8WYJ6 367 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 RAD54LQ92698 747 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 KIAA1024Q9UPX6 916 aa14.69□□□□□ -0.06
CHD3-210ENST00000479080 MAFBQ9Y5Q3 323 aaPredicted RBP14.69□□□□□ -0.06
CHD3-210ENST00000479080 EMSYQ7Z589 1322 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 A6NJR5 290 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 DUSP11O75319 330 aaKnown RBP14.68□□□□□ -0.06
CHD3-210ENST00000479080 PSAPP07602 524 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 CASP1P29466 404 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 MDM2Q00987 491 aaPredicted RBP14.68□□□□□ -0.06
CHD3-210ENST00000479080 MCM6Q14566 821 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 MTFR1Q15390 333 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 LHX8Q68G74 356 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 MIS18BP1Q6P0N0 1132 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 TPH2Q8IWU9 490 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 STAMQ92783 540 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 CEP89Q96ST8 783 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 C16orf70Q9BSU1 422 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 Q9Y3F1 56 aa14.68□□□□□ -0.06
CHD3-210ENST00000479080 KDM3AQ9Y4C1 1321 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 LGALS2P05162 132 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 SLFN14P0C7P3 912 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 PTMSP20962 102 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 QARSP47897 775 aaKnown RBP14.67□□□□□ -0.06
CHD3-210ENST00000479080 GJA9P57773 515 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 PSMC5P62195 406 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 BEX3Q00994 111 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 UTP14CQ5TAP6 766 aaKnown RBP14.67□□□□□ -0.06
CHD3-210ENST00000479080 RRAGBQ5VZM2 374 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 CCSAPQ6IQ19 270 aaPredicted RBP14.67□□□□□ -0.06
CHD3-210ENST00000479080 ANO5Q75V66 913 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 C4orf19Q8IY42 314 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 ERMNQ8TAM6 284 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 PIGOQ8TEQ8 1089 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 KAT2BQ92831 832 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 ERCC4Q92889 916 aaPredicted RBP14.67□□□□□ -0.06
CHD3-210ENST00000479080 CALML4Q96GE6 196 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 TIGD1Q96MW7 591 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 UNC93B1Q9H1C4 597 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 KBTBD4Q9NVX7 518 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 DDX20Q9UHI6 824 aaKnown RBP14.67□□□□□ -0.06
CHD3-210ENST00000479080 SAMM50Q9Y512 469 aa14.67□□□□□ -0.06
CHD3-210ENST00000479080 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 PGK1P00558 417 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 ZNF286BP0CG31 522 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 MUTP22033 750 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 CNGA1P29973 690 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 TXLNAP40222 546 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 STAT6P42226 847 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 SLC12A3P55017 1021 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 PRKCEQ02156 737 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 PLA2G4FQ68DD2 849 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 CAVIN1Q6NZI2 390 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms