RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ARVCFO00192 962 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 DGKIO75912 1065 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 VPS72Q15906 364 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 OLFML2BQ68BL8 750 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 RPTNQ6XPR3 784 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 ZNF605Q86T29 641 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 ZC3H7AQ8IWR0 971 aaKnown RBP7.16□□□□□ -1.26
CCDC171-207ENST00000478913 DIRC2Q96SL1 478 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 KCNJ15Q99712 375 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 JAM3Q9BX67 310 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 NSUN3Q9H649 340 aaKnown RBP7.16□□□□□ -1.26
CCDC171-207ENST00000478913 IPPKQ9H8X2 491 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 NMRK2Q9NPI5 230 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 PLAAQ9Y263 795 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-207ENST00000478913 BIVM-ERCC5R4GMW8 1640 aa7.16□□□□□ -1.26
CCDC171-207ENST00000478913 CUL9Q8IWT3 2517 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 ZC3H12DA2A288 527 aaKnown RBP7.15□□□□□ -1.26
CCDC171-207ENST00000478913 F8W031 263 aaPredicted RBP7.15□□□□□ -1.26
CCDC171-207ENST00000478913 ABLIM1O14639 778 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 MLANAQ16655 118 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 PRR23BQ6ZRT6 265 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 NINJ1Q92982 152 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 PEX11GQ96HA9 241 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 SCLYQ96I15 445 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 MTFR1LQ9H019 292 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 AP5M1Q9H0R1 490 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 CDIP1Q9H305 208 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 EPB41L4BQ9H329 900 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 RXFP1Q9HBX9 757 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
CCDC171-207ENST00000478913 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.15□□□□□ -1.26
CCDC171-207ENST00000478913 KLHL14Q9P2G3 628 aa7.15□□□□□ -1.26
CCDC171-207ENST00000478913 GOLGA3Q08378 1498 aa7.15□□□□□ -1.27
CCDC171-207ENST00000478913 ASXL1Q8IXJ9 1541 aa7.15□□□□□ -1.27
CCDC171-207ENST00000478913 RGPD1P0DJD0 1748 aa7.15□□□□□ -1.27
CCDC171-207ENST00000478913 TCRBV16S1A1N1A0A5B0 115 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 OPA1O60313 960 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 GNAT1P11488 350 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 NKTRP30414 1462 aaKnown RBP7.14□□□□□ -1.27
CCDC171-207ENST00000478913 SLC6A11P48066 632 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 MAPKAPK2P49137 400 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 FXR1P51114 621 aaKnown RBP eCLIP7.14□□□□□ -1.27
CCDC171-207ENST00000478913 FSTL1Q12841 308 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 CHRNA2Q15822 529 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 PLEKHN1Q494U1 663 aaPredicted RBP7.14□□□□□ -1.27
CCDC171-207ENST00000478913 FAM47CQ5HY64 1035 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 ZC3H14Q6PJT7 736 aaKnown RBP7.14□□□□□ -1.27
CCDC171-207ENST00000478913 NIM1KQ8IY84 436 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 PCDH19Q8TAB3 1148 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 MAP3K5Q99683 1374 aa7.14□□□□□ -1.27
CCDC171-207ENST00000478913 MAGEC2Q9UBF1 373 aaPredicted RBP7.14□□□□□ -1.27
CCDC171-207ENST00000478913 ARHGAP35Q9NRY4 1499 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 HRKO00198 91 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 IRS4O14654 1257 aaPredicted RBP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 DNAJC8O75937 253 aaPredicted RBP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 ASLP04424 464 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 SDSP20132 328 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 IGFALSP35858 605 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 YBX1P67809 324 aaKnown RBP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 ST5P78524 1137 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 DALRD3Q5D0E6 543 aaKnown RBP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 EGFLAMQ63HQ2 1017 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 SEC14L1Q92503 715 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 FBXW5Q969U6 566 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 ZNF552Q9H707 407 aaPredicted RBP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 SIT1Q9Y3P8 196 aa7.13□□□□□ -1.27
CCDC171-207ENST00000478913 TNPO3Q9Y5L0 923 aaKnown RBP7.13□□□□□ -1.27
CCDC171-207ENST00000478913 KIF27Q86VH2 1401 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 B4E1Z4 1266 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 KRIT1O00522 736 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 WNT9AO14904 365 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 GSTA4O15217 222 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 MAFKO60675 156 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 GYS2P54840 703 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 STEAP3Q658P3 488 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 OTOP3Q7RTS5 596 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 DHX37Q8IY37 1157 aaKnown RBP7.12□□□□□ -1.27
CCDC171-207ENST00000478913 PIP4K2CQ8TBX8 421 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 PANK1Q8TE04 598 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 MFSD3Q96ES6 412 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 CATSPERZQ9NTU4 200 aa7.12□□□□□ -1.27
CCDC171-207ENST00000478913 INTS7Q9NVH2 962 aaKnown RBP7.12□□□□□ -1.27
CCDC171-207ENST00000478913 PZPP20742 1482 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 WASHC2CQ9Y4E1 1318 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 CCDC66A2RUB6 948 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 HGSO14964 777 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-207ENST00000478913 SGSM2O43147 1006 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 PYGMP11217 842 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 VIPR1P32241 457 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 FLT3P36888 993 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 DNM2P50570 870 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 SRSF3P84103 164 aaKnown RBP7.11□□□□□ -1.27
CCDC171-207ENST00000478913 PRR5P85299 388 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 ZNF460Q14592 562 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms