RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 AP5Z1O43299 807 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 RRP9O43818 475 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 HLA-DOAP06340 250 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 PARP1P09874 1014 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 SRGNP10124 158 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 MMP14P50281 582 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 PLCD1P51178 756 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 TRAF1Q13077 416 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 MORC3Q14149 939 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 NPY5RQ15761 445 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 LONRF3Q496Y0 759 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 DNTTIP2Q5QJE6 756 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 GPATCH4Q5T3I0 446 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 TXNRD3Q86VQ6 643 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 SRBD1Q8N5C6 995 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 DTWD1Q8N5C7 304 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 ANKRD20A12PQ8NF67 263 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 MYRIPQ8NFW9 859 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 GPR152Q8TDT2 470 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 SH3RF3Q8TEJ3 882 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 RRP36Q96EU6 259 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 ZC3H12CQ9C0D7 883 aaKnown RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 ZMYND12Q9H0C1 365 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 TTC12Q9H892 705 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-203ENST00000478909 C6orf50Q9HD87 102 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 INCENPQ9NQS7 918 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 GJB4Q9NTQ9 266 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 VPS54Q9P1Q0 977 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 KCNJ14Q9UNX9 436 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 PCDHB6Q9Y5E3 794 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 SNED1Q8TER0 1413 aa6.89□□□□□ -1.31
CMSS1-203ENST00000478909 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
CMSS1-203ENST00000478909 POLR2DO15514 142 aaKnown RBP6.88□□□□□ -1.31
CMSS1-203ENST00000478909 PRDM1O75626 825 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 PLEKHA8P1O95397 391 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 GHRHP01286 108 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 SNHG28P0DPA3 235 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 PTGS1P23219 599 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 CDK8P49336 464 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 RHBDL3P58872 404 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 GABPAQ06546 454 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 DDR1Q08345 913 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 NCAPHQ15003 741 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 FOXR2Q6PJQ5 311 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 SUPT20HQ8NEM7 779 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 TEKT1Q969V4 418 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 CCDC47Q96A33 483 aaKnown RBP6.88□□□□□ -1.31
CMSS1-203ENST00000478909 IQCDQ96DY2 449 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
CMSS1-203ENST00000478909 RAB34Q9BZG1 259 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 CCSER1Q9C0I3 900 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 CSRNP2Q9H175 543 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 KCNF1Q9H3M0 494 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 IL17RBQ9NRM6 502 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 MAD2L2Q9UI95 211 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 DAGLAQ9Y4D2 1042 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 PCDHA5Q9Y5H7 936 aa6.88□□□□□ -1.31
CMSS1-203ENST00000478909 COL11A2P13942 1736 aaPredicted RBP6.87□□□□□ -1.31
CMSS1-203ENST00000478909 CYP2D7A0A087X1C5 515 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 DTNBO60941 627 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 DEAF1O75398 565 aaPredicted RBP6.87□□□□□ -1.31
CMSS1-203ENST00000478909 TTLL1O95922 423 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 SERPINC1P01008 464 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 SKILP12757 684 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 GCFC2P16383 781 aaKnown RBP6.87□□□□□ -1.31
CMSS1-203ENST00000478909 ZNF18P17022 549 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 SCNN1AP37088 669 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 UBASH3AP57075 661 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 FANCCQ00597 558 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 AMPD3Q01432 767 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 PNOCQ13519 176 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 STIM1Q13586 685 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 TRIM14Q14142 442 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 KCNB1Q14721 858 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 FILIP1LQ4L180 1135 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 SOGA3Q5TF21 947 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 STRIP1Q5VSL9 837 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 GDF6Q6KF10 455 aaPredicted RBP6.87□□□□□ -1.31
CMSS1-203ENST00000478909 DPP8Q6V1X1 898 aaPredicted RBP6.87□□□□□ -1.31
CMSS1-203ENST00000478909 DTHD1Q6ZMT9 781 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 VSTM4Q8IW00 320 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 SPC24Q8NBT2 197 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 OR13H1Q8NG92 308 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 NOC3LQ8WTT2 800 aaKnown RBP6.87□□□□□ -1.31
CMSS1-203ENST00000478909 CCDC51Q96ER9 411 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 ZDHHC15Q96MV8 337 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 CLIC6Q96NY7 704 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 TMEM47Q9BQJ4 181 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 VPS33BQ9H267 617 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
CMSS1-203ENST00000478909 POLLQ9UGP5 575 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms