RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
GARNL3-215ENST00000478702 EMSYQ7Z589 1322 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 ESYT2A0FGR8 921 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 PRPF3O43395 683 aaKnown RBP18.04■□□□□ 0.48
GARNL3-215ENST00000478702 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
GARNL3-215ENST00000478702 PKN1Q16512 942 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 PHKBQ93100 1093 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 ZNF274Q96GC6 653 aaPredicted RBP18.04■□□□□ 0.48
GARNL3-215ENST00000478702 EHMT1Q9H9B1 1298 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 PCDHA6Q9UN73 950 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 PCDHA8Q9Y5H6 950 aa18.04■□□□□ 0.48
GARNL3-215ENST00000478702 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 TREHO43280 583 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 AMHP03971 560 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 CLK2P49760 499 aaKnown RBP18.03■□□□□ 0.48
GARNL3-215ENST00000478702 AP3B2Q13367 1082 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 EPC2Q52LR7 807 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 ATP6V0A1Q93050 837 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 GLT8D2Q9H1C3 349 aa18.03■□□□□ 0.48
GARNL3-215ENST00000478702 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.02■□□□□ 0.48
GARNL3-215ENST00000478702 C17orf102A2RUQ5 167 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 SMCO2A6NFE2 343 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 H3BRB1 525 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 LGALS2P05162 132 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 SMIM10L2AP0DMW4 78 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 SMIM10L2BP0DMW5 78 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 TTC3P53804 2025 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 PTCRAQ6ISU1 281 aaPredicted RBP18.02■□□□□ 0.48
GARNL3-215ENST00000478702 NLRX1Q86UT6 975 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 GJD3Q8N144 294 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 NEK9Q8TD19 979 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.48
GARNL3-215ENST00000478702 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 GPRASP2Q96D09 838 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 MRPL38Q96DV4 380 aaKnown RBP18.02■□□□□ 0.48
GARNL3-215ENST00000478702 SLC26A6Q9BXS9 759 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 ANO3Q9BYT9 981 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 ZMYND12Q9H0C1 365 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 RNPEPQ9H4A4 650 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 TUT1Q9H6E5 874 aaKnown RBP18.02■□□□□ 0.48
GARNL3-215ENST00000478702 RTEL1Q9NZ71 1219 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 UBIAD1Q9Y5Z9 338 aa18.02■□□□□ 0.48
GARNL3-215ENST00000478702 C5orf42Q9H799 3197 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 GRXCR2A6NFK2 248 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 SEC24BO95487 1268 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 FOSP01100 380 aaPredicted RBP18.01■□□□□ 0.47
GARNL3-215ENST00000478702 ITGB5P18084 799 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 AKAP17AQ02040 695 aaKnown RBP18.01■□□□□ 0.47
GARNL3-215ENST00000478702 NEDD9Q14511 834 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 METTL7BQ6UX53 244 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 PGBD1Q96JS3 809 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 SENP7Q9BQF6 1050 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 LARP6Q9BRS8 491 aaKnown RBP18.01■□□□□ 0.47
GARNL3-215ENST00000478702 MLXIPQ9HAP2 919 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 TELO2Q9Y4R8 837 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 WDR81Q562E7 1941 aa18.01■□□□□ 0.47
GARNL3-215ENST00000478702 H3BNC9 293 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 CTSHP09668 335 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 SREBF1P36956 1147 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 C8orf34Q49A92 452 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 CCDC148Q8NFR7 591 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 CDHR1Q96JP9 859 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 SAMD11Q96NU1 681 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 TMEM260Q9NX78 707 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 ZNF318Q5VUA4 2279 aa18■□□□□ 0.47
GARNL3-215ENST00000478702 H3BQ06 376 aaPredicted RBP17.99■□□□□ 0.47
GARNL3-215ENST00000478702 CPLX1O14810 134 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 PPFIA3O75145 1194 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 UPP2O95045 317 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 KCNA2P16389 499 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 STK3Q13188 491 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 GPM6BQ13491 265 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 MTMR1Q13613 665 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 CYFIP1Q7L576 1253 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
GARNL3-215ENST00000478702 BANK1Q8NDB2 785 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 SEPT8Q92599 483 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 C6orf50Q9HD87 102 aa17.99■□□□□ 0.47
GARNL3-215ENST00000478702 PRR33A8MZF0 331 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 AK2P54819 239 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 ADAM17P78536 824 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 COL19A1Q14993 1142 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 ANKRD1Q15327 319 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 PTPROQ16827 1216 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 TIGD5Q53EQ6 642 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 TCEAL5Q5H9L2 206 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 CPLX2Q6PUV4 134 aaKnown RBP17.98■□□□□ 0.47
GARNL3-215ENST00000478702 TRIM50Q86XT4 487 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 TMEM192Q8IY95 271 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 GIMAP8Q8ND71 665 aaPredicted RBP17.98■□□□□ 0.47
GARNL3-215ENST00000478702 YME1L1Q96TA2 773 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 GPR20Q99678 358 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 JADE2Q9NQC1 790 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 SETD4Q9NVD3 440 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 PIEZO1Q92508 2521 aa17.98■□□□□ 0.47
GARNL3-215ENST00000478702 NOP56O00567 594 aaKnown RBP17.97■□□□□ 0.47
GARNL3-215ENST00000478702 ADAMTS3O15072 1205 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms