RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 ZSWIM5Q9P217 1185 aa12.26□□□□□ -0.45
APTX-222ENST00000478279 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
APTX-222ENST00000478279 DCHS1Q96JQ0 3298 aa12.26□□□□□ -0.45
APTX-222ENST00000478279 BAZ2BQ9UIF8 2168 aaKnown RBP12.26□□□□□ -0.45
APTX-222ENST00000478279 KIAA1671Q9BY89 1806 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 PLXNA3P51805 1871 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 B4E1Z4 1266 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 H0Y858 1186 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 FIBPO43427 364 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 PTPN21Q16825 1174 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 ANKRD45Q5TZF3 282 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 TSHZ1Q6ZSZ6 1077 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 RTN4RL1Q86UN2 441 aaPredicted RBP12.25□□□□□ -0.45
APTX-222ENST00000478279 NPAS4Q8IUM7 802 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 LINC01599Q8WXQ3 324 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 SUSD6Q92537 303 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 SENP7Q9BQF6 1050 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 TLE6Q9H808 572 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 TLR9Q9NR96 1032 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 TELO2Q9Y4R8 837 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 CDY2AQ9Y6F7 541 aa12.25□□□□□ -0.45
APTX-222ENST00000478279 PALM3A6NDB9 673 aaPredicted RBP12.24□□□□□ -0.45
APTX-222ENST00000478279 ZNF292O60281 2723 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 CD52P31358 61 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 PPFIA1Q13136 1202 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 FRMPD4Q14CM0 1322 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 PAN2Q504Q3 1202 aaKnown RBP12.24□□□□□ -0.45
APTX-222ENST00000478279 IFIT1BQ5T764 474 aaKnown RBP12.24□□□□□ -0.45
APTX-222ENST00000478279 ATP8B4Q8TF62 1192 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 DNAJB3Q8WWF6 145 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 AGO3Q9H9G7 860 aaKnown RBP12.24□□□□□ -0.45
APTX-222ENST00000478279 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 MAD2L2Q9UI95 211 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 PCDHGC5Q9Y5F6 944 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
APTX-222ENST00000478279 MYO10Q9HD67 2058 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
APTX-222ENST00000478279 RPLP2P05387 115 aaKnown RBP12.23□□□□□ -0.45
APTX-222ENST00000478279 MRPS6P82932 125 aaKnown RBP12.23□□□□□ -0.45
APTX-222ENST00000478279 SP4Q02446 784 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 UBE3AQ05086 875 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 GRIK4Q16099 956 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 MICAL1Q8TDZ2 1067 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 PIGSQ96S52 555 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
APTX-222ENST00000478279 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 TUBE1Q9UJT0 475 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
APTX-222ENST00000478279 MBLAC1A4D2B0 266 aaPredicted RBP12.22□□□□□ -0.45
APTX-222ENST00000478279 PER2O15055 1255 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 PPFIA3O75145 1194 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 PDGFBP01127 241 aaPredicted RBP12.22□□□□□ -0.45
APTX-222ENST00000478279 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
APTX-222ENST00000478279 DUSP6Q16828 381 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 MARCH8Q5T0T0 291 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
APTX-222ENST00000478279 VN1R2Q8NFZ6 395 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 KRT23Q9C075 422 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 RIOX1Q9H6W3 641 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 ERAP1Q9NZ08 941 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 PCDHB12Q9Y5F1 795 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 PLXNA4Q9HCM2 1894 aa12.22□□□□□ -0.45
APTX-222ENST00000478279 PNMA6FA0A0J9YX94 578 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 PRR23AA6NEV1 266 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 SCG2P13521 617 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 SDSP20132 328 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 NBL1P41271 181 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 GATMP50440 423 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
APTX-222ENST00000478279 SEC23AQ15436 765 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 IMMTQ16891 758 aaKnown RBP12.21□□□□□ -0.45
APTX-222ENST00000478279 IER5Q5VY09 327 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 TMEM184AQ6ZMB5 413 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 ERMP1Q7Z2K6 904 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 NLRX1Q86UT6 975 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 SEPT1Q8WYJ6 367 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 RILPL2Q969X0 211 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 S1PR5Q9H228 398 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 CNNM2Q9H8M5 875 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 PADI3Q9ULW8 664 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
APTX-222ENST00000478279 EP300Q09472 2414 aaPredicted RBP12.21□□□□□ -0.46
APTX-222ENST00000478279 LOXHD1Q8IVV2 1947 aa12.2□□□□□ -0.46
APTX-222ENST00000478279 GSTTP1A0A1W2PQM5 241 aa12.2□□□□□ -0.46
APTX-222ENST00000478279 RRN3P2A6NIE6 340 aa12.2□□□□□ -0.46
APTX-222ENST00000478279 CYTH3O43739 400 aa12.2□□□□□ -0.46
APTX-222ENST00000478279 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
APTX-222ENST00000478279 MARK3P27448 753 aa12.2□□□□□ -0.46
APTX-222ENST00000478279 ERVFC1P60507 584 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms