RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PRPF3O43395 683 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 ORC4O43929 436 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 TNKSO95271 1327 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 FGRP09769 529 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 SFPQP23246 707 aaKnown RBP eCLIP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 HMGB2P26583 209 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 KRT2P35908 639 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 PNOCQ13519 176 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 POSTNQ15063 836 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 DUOXA2Q1HG44 320 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 C11orf91Q3C1V1 193 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 FOCADQ5VW36 1801 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 CATIPQ7Z7H3 387 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 METTL16Q86W50 562 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 IQCA1Q86XH1 822 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 STK11IPQ8N1F8 1099 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 PDCL2Q8N4E4 241 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 MIGA1Q8NAN2 632 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 MLKLQ8NB16 471 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 FANCBQ8NB91 859 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 GALNT11Q8NCW6 608 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 FLAD1Q8NFF5 587 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 KIF18AQ8NI77 898 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 NUP133Q8WUM0 1156 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 MRRFQ96E11 262 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 ASIC4Q96FT7 647 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 FAM46AQ96IP4 442 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 MYRFLQ96LU7 910 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 CLIC6Q96NY7 704 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 ZKSCAN3Q9BRR0 538 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 RIOK1Q9BRS2 568 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 ANKRD2Q9GZV1 360 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 BRMS1Q9HCU9 246 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 ABCF2Q9UG63 623 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 FBXO2Q9UK22 296 aaPredicted RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 USP20Q9Y2K6 914 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 SRPRBQ9Y5M8 271 aaKnown RBP5.61□□□□□ -1.51
SF3B6-202ENST00000478050 TNRC18O15417 2968 aaPredicted RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 TRIM75PA6NK02 468 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 CA12O43570 354 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 MMP20O60882 483 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 DKK1O94907 266 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 WISP1O95388 367 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 EGFRP00533 1210 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 SERPINC1P01008 464 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 IGFBP4P22692 258 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 GUCY1A2P33402 732 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 GYG1P46976 350 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 TOB1P50616 345 aaPredicted RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 UBASH3AP57075 661 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 DEFB115Q30KQ5 88 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 LONRF3Q496Y0 759 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 NOM1Q5C9Z4 860 aaKnown RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 IFIT1BQ5T764 474 aaKnown RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 NT5DC1Q5TFE4 455 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 FAM117BQ6P1L5 589 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 ARMCX5Q6P1M9 558 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 BEND4Q6ZU67 534 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 FBXO33Q7Z6M2 555 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 ADGRA1Q86SQ6 560 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 GLYCTKQ8IVS8 523 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 RGL4Q8IZJ4 473 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 ABI1Q8IZP0 508 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 ENAHQ8N8S7 591 aaPredicted RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 GIMAP7Q8NHV1 300 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 GIPC2Q8TF65 315 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 SDR42E1Q8WUS8 393 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 SMARCE1Q969G3 411 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 FERMT2Q96AC1 680 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 FAM84BQ96KN1 310 aaPredicted RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 FAM83CQ9BQN1 747 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 PYM1Q9BRP8 204 aaKnown RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 CRNKL1Q9BZJ0 848 aaKnown RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 HSD3B7Q9H2F3 369 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 ATP8A2Q9NTI2 1148 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 CGNQ9P2M7 1197 aaKnown RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 ARPP21Q9UBL0 812 aaPredicted RBP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 MAN1B1Q9UKM7 699 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 MINPP1Q9UNW1 487 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 KCNJ14Q9UNX9 436 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
SF3B6-202ENST00000478050 PCDHA5Q9Y5H7 936 aa5.6□□□□□ -1.51
SF3B6-202ENST00000478050 BAZ2BQ9UIF8 2168 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 ANKRD33BA6NCL7 494 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 GOLGA6L9A6NEM1 432 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 GLTPD2A6NH11 291 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 USP27XA6NNY8 438 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 UBE2Q2LH0YL09 131 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 OPLAHO14841 1288 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 POLR2DO15514 142 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 RPS6KA4O75676 772 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 C8AP07357 584 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 TOP1P11387 765 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 BMP3P12645 472 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 SOX18P35713 384 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 TRAPPC10P48553 1259 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 SARSP49591 514 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 RPS8P62241 208 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms