RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 TPCN1Q9ULQ1 816 aa15.71■□□□□ 0.11
SOX2-OT-208ENST00000477928 KAT6AQ92794 2004 aa15.71■□□□□ 0.11
SOX2-OT-208ENST00000477928 UNC80Q8N2C7 3258 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 LCHNA4D1U4 455 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 CXCL10P02778 98 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 CA3P07451 260 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 GNAT1P11488 350 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 ZNF76P36508 570 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 USP11P51784 963 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 NEK4P51957 841 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 NLRP5P59047 1200 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 ACTR2P61160 394 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 WDR5P61964 334 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 IGBP1P78318 339 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 MARCH8Q5T0T0 291 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 MAFAQ8NHW3 353 aaPredicted RBP15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 GJA10Q969M2 543 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 SDF4Q9BRK5 362 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 UPF2Q9HAU5 1272 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 GJB4Q9NTQ9 266 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 SLC9A2Q9UBY0 812 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 MSRAQ9UJ68 235 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 PCDHA4Q9UN74 947 aa15.7■□□□□ 0.1
SOX2-OT-208ENST00000477928 TMEM265A0A087WTH1 108 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 EPOPA6NHQ4 379 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 RSPH10B2B2RC85 870 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 RFXAPO00287 272 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 DHX15O43143 795 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 LARGE1O95461 756 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 RPLP2P05387 115 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 RSPH10BP0C881 870 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 PPFIA1Q13136 1202 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 NPY5RQ15761 445 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 RAB30Q15771 203 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 FAM117BQ6P1L5 589 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 PLA2G4DQ86XP0 818 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 HERC6Q8IVU3 1022 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 TET1Q8NFU7 2136 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 GLG1Q92896 1179 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 GTF3C6Q969F1 213 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 PRDM6Q9NQX0 595 aa15.69■□□□□ 0.1
SOX2-OT-208ENST00000477928 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 CAND2O75155 1236 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 LGR5O75473 907 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 ACTN1P12814 892 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 SLC26A2P50443 739 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 GRIK4Q16099 956 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 PPP2R2DQ66LE6 453 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 CNKSR3Q6P9H4 555 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 MOXD1Q6UVY6 613 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 DBF4BQ8NFT6 615 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 LENG9Q96B70 501 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 SMARCAD1Q9H4L7 1026 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 SLC28A3Q9HAS3 691 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 TBC1D22BQ9NU19 505 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 ERAP1Q9NZ08 941 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 PCDHA11Q9Y5I1 949 aa15.68■□□□□ 0.1
SOX2-OT-208ENST00000477928 TRIP12Q14669 1992 aaPredicted RBP15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 M0R2N6 131 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 CTDNEP1O95476 244 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 INSRRP14616 1297 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 PLCB4Q15147 1175 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 ME3Q16798 604 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 CCDC60Q8IWA6 550 aaPredicted RBP15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 BLIDQ8IZY5 108 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 SH2B1Q9NRF2 756 aaPredicted RBP15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 KCNJ14Q9UNX9 436 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 LIMCH1Q9UPQ0 1083 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 NRCAMQ92823 1304 aa15.67■□□□□ 0.1
SOX2-OT-208ENST00000477928 ATG7O95352 703 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 CHRNA1P02708 482 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 PRR16Q569H4 304 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 KRT40Q6A162 431 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 PLPPR4Q7Z2D5 763 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 NECAB1Q8N987 351 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 SLC9A7Q96T83 725 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 NAP1L4Q99733 375 aaKnown RBP15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 FAM49AQ9H0Q0 323 aaPredicted RBP15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 AZI2Q9H6S1 392 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
SOX2-OT-208ENST00000477928 CYP3A7-CYP3A51PA0A087WV96 503 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 IPO5O00410 1097 aaKnown RBP15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 BAIAP3O94812 1187 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 TDP2O95551 362 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 GHRP10912 638 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 ATP4AP20648 1035 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 CYP3A7P24462 503 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 KCNJ6P48051 423 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 TAP1Q03518 808 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 TMEM62Q0P6H9 643 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 RABEP1Q15276 862 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 TRMT1LQ7Z2T5 733 aaKnown RBP15.65■□□□□ 0.1
SOX2-OT-208ENST00000477928 KRT25Q7Z3Z0 450 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms