RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 MYLIPQ8WY64 445 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 HERVK_113Q902F9 699 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 ATP6V0A1Q93050 837 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 TIFAQ96CG3 184 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 PBX4Q9BYU1 374 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 SEMA6BQ9H3T3 888 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 TUT1Q9H6E5 874 aaKnown RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 C6orf50Q9HD87 102 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 JADE2Q9NQC1 790 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 SETD4Q9NVD3 440 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF215Q9UL58 517 aaPredicted RBP9.46□□□□□ -0.9
ERCC8-205ENST00000477893 UBIAD1Q9Y5Z9 338 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 SLC4A7Q9Y6M7 1214 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 CDH23Q9H251 3354 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 TANC1Q9C0D5 1861 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 MYH7BA7E2Y1 1941 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 SCN5AQ14524 2016 aa9.46□□□□□ -0.9
ERCC8-205ENST00000477893 TREHO43280 583 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 PRPF3O43395 683 aaKnown RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 ARP10275 920 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 CKBP12277 381 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 ACTN1P12814 892 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 MYOGP15173 224 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 FOSL2P15408 326 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 SELPP16109 830 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 IGBP1P78318 339 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 AP3B2Q13367 1082 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF618Q5T7W0 954 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 RASIP1Q5U651 963 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 TMCO2Q7Z6W1 182 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 REXO1Q8N1G1 1221 aaKnown RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 CAGE1Q8TC20 777 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 AFAP1L1Q8TED9 768 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 CCDC12Q8WUD4 166 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 GLG1Q92896 1179 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 VWCEQ96DN2 955 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 CDHR1Q96JP9 859 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 CDX2Q99626 313 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 MXRA8Q9BRK3 442 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 AGXT2Q9BYV1 514 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 JPH1Q9HDC5 661 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 MSRAQ9UJ68 235 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 YBX2Q9Y2T7 364 aaKnown RBP9.45□□□□□ -0.9
ERCC8-205ENST00000477893 NID2Q14112 1375 aa9.45□□□□□ -0.9
ERCC8-205ENST00000477893 GSTTP1A0A1W2PQM5 241 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 FOSP01100 380 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 ATP2A2P16615 1042 aaKnown RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 RFC2P35250 354 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 SREBF1P36956 1147 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 NLRP5P59047 1200 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 SSRP1Q08945 709 aaKnown RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 PTK7Q13308 1070 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 ITGB3BPQ13352 177 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 GRIN2CQ14957 1233 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 NTRK3Q16288 839 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 CEP55Q53EZ4 464 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 FAM117BQ6P1L5 589 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 PLA2G4DQ86XP0 818 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 TRIM22Q8IYM9 498 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 GIMAP8Q8ND71 665 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 LMBR1Q8WVP7 490 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 ZBTB10Q96DT7 871 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 AIFM3Q96NN9 605 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 SENP7Q9BQF6 1050 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 RNF26Q9BY78 433 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 GLT8D2Q9H1C3 349 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 RNPEPQ9H4A4 650 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 AGO4Q9HCK5 861 aaKnown RBP9.44□□□□□ -0.9
ERCC8-205ENST00000477893 SLC9A2Q9UBY0 812 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 STXBP5LQ9Y2K9 1186 aa9.44□□□□□ -0.9
ERCC8-205ENST00000477893 COL6A3P12111 3177 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 FAM86B1E9PN63 330 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 NBNO60934 754 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 PFKMP08237 780 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 FAM86B2P0C5J1 330 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 IFNAR1P17181 557 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 KCNJ6P48051 423 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
ERCC8-205ENST00000477893 PPFIA1Q13136 1202 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 RAB30Q15771 203 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TCTN1Q2MV58 587 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TRIM71Q2Q1W2 868 aaKnown RBP9.43□□□□□ -0.9
ERCC8-205ENST00000477893 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TRMT1LQ7Z2T5 733 aaKnown RBP9.43□□□□□ -0.9
ERCC8-205ENST00000477893 SERINC5Q86VE9 423 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 FBXL16Q8N461 479 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 SLC17A8Q8NDX2 589 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 CCDC148Q8NFR7 591 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 SEPT1Q8WYJ6 367 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TM6SF1Q9BZW5 370 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 ZMYND12Q9H0C1 365 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 AZI2Q9H6S1 392 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms