RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SPTBN5Q9NRC6 3674 aaKnown RBP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 DNAJC25-GNG10A0A024R161 153 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 MANSC4A6NHS7 340 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-207ENST00000477676 TREHO43280 583 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 BRD1O95696 1058 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 DDX58O95786 925 aaKnown RBP5.84□□□□□ -1.47
CKS1B-207ENST00000477676 ZBTB48P10074 688 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-207ENST00000477676 IL1R1P14778 569 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 NF2P35240 595 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 MAPK8P45983 427 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 RASA3Q14644 834 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 DLGAP5Q15398 846 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 ZBTB37Q5TC79 503 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 PI16Q6UXB8 463 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 C12orf40Q86WS4 652 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 MFSD2AQ8NA29 543 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 RETREG2Q8NC44 543 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 BRI3BPQ8WY22 251 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 FRMD6Q96NE9 622 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 GNEQ9Y223 722 aaKnown RBP5.84□□□□□ -1.47
CKS1B-207ENST00000477676 ST14Q9Y5Y6 855 aa5.84□□□□□ -1.47
CKS1B-207ENST00000477676 MYH2Q9UKX2 1941 aa5.84□□□□□ -1.48
CKS1B-207ENST00000477676 F6X3S4 739 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 SLITRK5O94991 958 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 CTGFP29279 349 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
CKS1B-207ENST00000477676 MMP14P50281 582 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 INHBEP58166 350 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 DLG4P78352 724 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 RING1Q06587 406 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 SFRP5Q5T4F7 317 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 ARMCX6Q7L4S7 300 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 MFSD4AQ8N468 514 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 KAZALD1Q96I82 304 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 ZNF333Q96JL9 665 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 ARHGAP39Q9C0H5 1083 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 ANKRD2Q9GZV1 360 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 VEZTQ9HBM0 779 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 FAM8A1Q9UBU6 413 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 PTCH2Q9Y6C5 1203 aa5.83□□□□□ -1.48
CKS1B-207ENST00000477676 MUC3AQ02505 3323 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 FAM205AQ6ZU69 1335 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 PDIA4P13667 645 aaKnown RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 BMP6P22004 513 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 HK2P52789 917 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 ETF1P62495 437 aaKnown RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 FKBP1AP62942 108 aaKnown RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 NFKB2Q00653 900 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 SP3Q02447 781 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 NEXNQ0ZGT2 675 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 DSC3Q14574 896 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 SKOR2Q2VWA4 1001 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 TWISTNBQ3B726 338 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 INTS3Q68E01 1043 aaKnown RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 PRRT2Q7Z6L0 340 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 FAM43AQ8N2R8 423 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 CXorf38Q8TB03 319 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 DNAAF4Q8WXU2 420 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 OPTNQ96CV9 577 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 SHISA4Q96DD7 197 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 ERO1AQ96HE7 468 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 FAM84BQ96KN1 310 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 MPHOSPH8Q99549 860 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 PUS3Q9BZE2 481 aaKnown RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 TMEM39BQ9GZU3 492 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 TDRD3Q9H7E2 651 aaKnown RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 CACNA2D2Q9NY47 1150 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 RTEL1Q9NZ71 1219 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 ZNF70Q9UC06 446 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-207ENST00000477676 PPP2R3BQ9Y5P8 575 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 SNCAIPQ9Y6H5 919 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 CAPN6Q9Y6Q1 641 aa5.82□□□□□ -1.48
CKS1B-207ENST00000477676 DOCK2Q92608 1830 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 ANKRD18BA2A2Z9 1011 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 PRAMEF27A3QJZ7 478 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 UNCXA6NJT0 531 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 H0YGN5 161 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 ENC1O14682 589 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 TRIM13O60858 407 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 VAMP4O75379 141 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 HPXP02790 462 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 TRHRP34981 398 aaPredicted RBP5.81□□□□□ -1.48
CKS1B-207ENST00000477676 GYG1P46976 350 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 KCNJ4P48050 445 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 CACNB3P54284 484 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 VGLL4Q14135 290 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 SUPT20HL1Q3ZLR7 823 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 BEND3Q5T5X7 828 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 THAP5Q7Z6K1 395 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 HID1Q8IV36 788 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 C3orf58Q8NDZ4 430 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 LINS1Q8NG48 757 aa5.81□□□□□ -1.48
CKS1B-207ENST00000477676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.81□□□□□ -1.484e-8■■■■□ 19.8
CKS1B-207ENST00000477676 TDRD7Q8NHU6 1098 aaKnown RBP5.81□□□□□ -1.48
CKS1B-207ENST00000477676 GRIN3AQ8TCU5 1115 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms