RNA–Protein interactions for RNA: ENST00000477585.1

AGRN-206, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 707 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-206ENST00000477585 MSH4O15457 936 aa27.49■■□□□ 1.99
AGRN-206ENST00000477585 TREHO43280 583 aa27.49■■□□□ 1.99
AGRN-206ENST00000477585 SLC34A2O95436 690 aa27.49■■□□□ 1.99
AGRN-206ENST00000477585 HMGN5P82970 282 aaKnown RBP27.49■■□□□ 1.99
AGRN-206ENST00000477585 SMAD3P84022 425 aaKnown RBP27.49■■□□□ 1.99
AGRN-206ENST00000477585 LMBR1Q8WVP7 490 aa27.49■■□□□ 1.99
AGRN-206ENST00000477585 MBOAT7Q96N66 472 aa27.49■■□□□ 1.99
AGRN-206ENST00000477585 NAP1L4Q99733 375 aaKnown RBP27.49■■□□□ 1.99
AGRN-206ENST00000477585 GTF3C3Q9Y5Q9 886 aa27.49■■□□□ 1.99
AGRN-206ENST00000477585 CAND2O75155 1236 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 MMP1P03956 469 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 MARK3P27448 753 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 PPFIA1Q13136 1202 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 NEK8Q86SG6 692 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 OXER1Q8TDS5 423 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 SLC5A5Q92911 643 aa27.48■■□□□ 1.99
AGRN-206ENST00000477585 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.47■■□□□ 1.99
AGRN-206ENST00000477585 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.47■■□□□ 1.99
AGRN-206ENST00000477585 RRN3P2A6NIE6 340 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 BACH1O14867 736 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 TDP2O95551 362 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 GCFC2P16383 781 aaKnown RBP27.47■■□□□ 1.99
AGRN-206ENST00000477585 PPP4R3AQ6IN85 833 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 PIK3AP1Q6ZUJ8 805 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 DEFB128Q7Z7B8 93 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 VWCEQ96DN2 955 aa27.47■■□□□ 1.99
AGRN-206ENST00000477585 GAS7O60861 476 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 ACTN1P12814 892 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 GRIK4Q16099 956 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 LETM2Q2VYF4 491 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 KRT40Q6A162 431 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 WNT8BQ93098 351 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 UIMC1Q96RL1 719 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 TEKT3Q9BXF9 490 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 ZNF302Q9NR11 478 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 DDX25Q9UHL0 483 aaKnown RBP27.46■■□□□ 1.99
AGRN-206ENST00000477585 PCDHA10Q9Y5I2 948 aa27.46■■□□□ 1.99
AGRN-206ENST00000477585 WDR64B1ANS9 1081 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 PSAPP07602 524 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 THPOP40225 353 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 MCM2P49736 904 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 PLCB4Q15147 1175 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 ZNF618Q5T7W0 954 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 LRCH2Q5VUJ6 765 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 TAF2Q6P1X5 1199 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 OTOP2Q7RTS6 562 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 CCDC60Q8IWA6 550 aaPredicted RBP27.45■■□□□ 1.98
AGRN-206ENST00000477585 FTOQ9C0B1 505 aaKnown RBP eCLIP27.45■■□□□ 1.982e-6■□□□□ 11.3
AGRN-206ENST00000477585 TRPC6Q9Y210 931 aa27.45■■□□□ 1.98
AGRN-206ENST00000477585 POTEB3A0JP26 581 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 MBLAC1A4D2B0 266 aaPredicted RBP27.44■■□□□ 1.98
AGRN-206ENST00000477585 INSRRP14616 1297 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 SFNP31947 248 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 NR5A1Q13285 461 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 SWSAP1Q6NVH7 229 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 TRAF7Q6Q0C0 670 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 POTEBQ6S5H4 581 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 DIS3L2Q8IYB7 885 aaKnown RBP27.44■■□□□ 1.98
AGRN-206ENST00000477585 TNFRSF25Q93038 417 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 BACH2Q9BYV9 841 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 TUBE1Q9UJT0 475 aa27.44■■□□□ 1.98
AGRN-206ENST00000477585 HBP1O60381 514 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 PSMD10O75832 226 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 CXCL10P02778 98 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 RPLP2P05387 115 aaKnown RBP27.43■■□□□ 1.98
AGRN-206ENST00000477585 JAK3P52333 1124 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 SAFBQ15424 915 aaKnown RBP eCLIP27.43■■□□□ 1.98
AGRN-206ENST00000477585 FAM109BQ6ICB4 259 aaPredicted RBP27.43■■□□□ 1.98
AGRN-206ENST00000477585 PDXDC2PQ6P474 469 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 RPAINQ86UA6 219 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 FAM184AQ8NB25 1140 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 ETNPPLQ8TBG4 499 aa27.43■■□□□ 1.98
AGRN-206ENST00000477585 MAFBQ9Y5Q3 323 aaPredicted RBP27.43■■□□□ 1.98
AGRN-206ENST00000477585 RSPH10B2B2RC85 870 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 RSPH10BP0C881 870 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 RSPH3Q86UC2 560 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 RDM1Q8NG50 284 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 ATP8B4Q8TF62 1192 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 C8orf76Q96K31 380 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 FAM20AQ96MK3 541 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 DISC1Q9NRI5 854 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 SAMM50Q9Y512 469 aa27.42■■□□□ 1.98
AGRN-206ENST00000477585 COL1A2P08123 1366 aa27.41■■□□□ 1.98
AGRN-206ENST00000477585 BTBD18B2RXH4 712 aa27.41■■□□□ 1.98
AGRN-206ENST00000477585 CCNT1O60563 726 aaKnown RBP27.41■■□□□ 1.98
AGRN-206ENST00000477585 GPNMBQ14956 572 aa27.41■■□□□ 1.98
AGRN-206ENST00000477585 EARS2Q5JPH6 523 aaKnown RBP27.41■■□□□ 1.98
AGRN-206ENST00000477585 MARCH8Q5T0T0 291 aa27.41■■□□□ 1.98
AGRN-206ENST00000477585 CXXC1Q9P0U4 656 aaPredicted RBP27.41■■□□□ 1.98
AGRN-206ENST00000477585 SLC4A7Q9Y6M7 1214 aa27.41■■□□□ 1.98
AGRN-206ENST00000477585 ZBBXA8MT70 800 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 TBX3O15119 743 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 SLC37A4O43826 429 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 NBNO60934 754 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 BAIAP3O94812 1187 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 FOSBP53539 338 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 CNKSR3Q6P9H4 555 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 BBXQ8WY36 941 aaPredicted RBP27.4■■□□□ 1.98
AGRN-206ENST00000477585 UNC45AQ9H3U1 944 aa27.4■■□□□ 1.98
AGRN-206ENST00000477585 KCNMB3Q9NPA1 279 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms