RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 UTP14CQ5TAP6 766 aaKnown RBP11.35□□□□□ -0.59
COL4A5-204ENST00000477429 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 FIBCD1Q8N539 461 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 CLP1Q92989 425 aaKnown RBP11.35□□□□□ -0.59
COL4A5-204ENST00000477429 PIGSQ96S52 555 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 AMNQ9BXJ7 453 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 MAF1Q9H063 256 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 AGO3Q9H9G7 860 aaKnown RBP11.35□□□□□ -0.59
COL4A5-204ENST00000477429 MLXIPQ9HAP2 919 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 RTEL1Q9NZ71 1219 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 PLAGL2Q9UPG8 496 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
COL4A5-204ENST00000477429 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 RALGAPA2Q2PPJ7 1873 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
COL4A5-204ENST00000477429 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 KLRF2D3W0D1 207 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 PDGFBP01127 241 aaPredicted RBP11.34□□□□□ -0.59
COL4A5-204ENST00000477429 MMP1P03956 469 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 ARP10275 920 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 SDSP20132 328 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 RRP1P56182 461 aaKnown RBP11.34□□□□□ -0.59
COL4A5-204ENST00000477429 ARHGAP4P98171 946 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 SP4Q02446 784 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 SMAD4Q13485 552 aaKnown RBP11.34□□□□□ -0.59
COL4A5-204ENST00000477429 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 TRIM67Q6ZTA4 783 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 VN1R2Q8NFZ6 395 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 CD207Q9UJ71 328 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 BARX2Q9UMQ3 279 aaPredicted RBP11.34□□□□□ -0.59
COL4A5-204ENST00000477429 LAMA4Q16363 1823 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 ASPMQ8IZT6 3477 aa11.34□□□□□ -0.59
COL4A5-204ENST00000477429 MYH6P13533 1939 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 BAZ2BQ9UIF8 2168 aaKnown RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 PALM3A6NDB9 673 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 LOC730098B7Z3J9 87 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ZNF213O14771 459 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ZBTB5O15062 677 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ATP9AO75110 1047 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 DGKIO75912 1065 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ZIC2O95409 532 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 EYA4O95677 639 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 PCP11498 1178 aaKnown RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ICAM3P32942 547 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ZXDAP98168 799 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 BMP8AQ7Z5Y6 402 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 RBM23Q86U06 439 aaKnown RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 SPPL3Q8TCT6 385 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 RILPL2Q969X0 211 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 ASIC4Q96FT7 647 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 PRRX2Q99811 253 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 C11orf84Q9BUA3 381 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 RNF41Q9H4P4 317 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-204ENST00000477429 CDH22Q9UJ99 828 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 FRMPD4Q14CM0 1322 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 FRYLO94915 3013 aa11.33□□□□□ -0.6
COL4A5-204ENST00000477429 H0Y858 1186 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 CAND2O75155 1236 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 RB1P06400 928 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 TGFB3P10600 412 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 CCND2P30279 289 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 CD52P31358 61 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 BTG3Q14201 252 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-204ENST00000477429 NBR1Q14596 966 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-204ENST00000477429 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 KLHL23Q8NBE8 558 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 SMRP1Q8NCR6 262 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 UPF3BQ9BZI7 483 aaKnown RBP11.32□□□□□ -0.6
COL4A5-204ENST00000477429 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 TLR9Q9NR96 1032 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 FAM50BQ9Y247 325 aa11.32□□□□□ -0.6
COL4A5-204ENST00000477429 USP15Q9Y4E8 981 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-204ENST00000477429 TTC3P53804 2025 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 GSTTP1A0A1W2PQM5 241 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 CYSRT1A8MQ03 144 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 GCOM1H8Y6P7 765 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-204ENST00000477429 PER2O15055 1255 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 POLR2MP0CAP2 368 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 MARK3P27448 753 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 NRIP1P48552 1158 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 NDUFV1P49821 464 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-204ENST00000477429 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
COL4A5-204ENST00000477429 FBXO47Q5MNV8 452 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 CWC27Q6UX04 472 aaKnown RBP11.31□□□□□ -0.6
COL4A5-204ENST00000477429 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 ADSSL1Q8N142 457 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms