RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 KPNA6O60684 536 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 F2P00734 622 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 CDC25AP30304 524 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 ZNF200P98182 395 aaPredicted RBP17.88■□□□□ 0.45
COPS3-207ENST00000477299 PLCB4Q15147 1175 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 GLG1Q92896 1179 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 ZBTB10Q96DT7 871 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 IPO9Q96P70 1041 aaKnown RBP17.88■□□□□ 0.45
COPS3-207ENST00000477299 ZNF302Q9NR11 478 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 HDAC6Q9UBN7 1215 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 TMEM150BA6NC51 233 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 WDR64B1ANS9 1081 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 ZBTB39O15060 712 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 STBD1O95210 358 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 PSAPP07602 524 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 CDK7P50613 346 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 STAT5BP51692 787 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 CTTNQ14247 550 aaKnown RBP17.87■□□□□ 0.45
COPS3-207ENST00000477299 TRIM60Q495X7 471 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 MIS18BP1Q6P0N0 1132 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 SMAP1Q8IYB5 467 aaPredicted RBP17.87■□□□□ 0.45
COPS3-207ENST00000477299 SLC43A3Q8NBI5 491 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 DYDC2Q96IM9 177 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 EMSYQ7Z589 1322 aa17.87■□□□□ 0.45
COPS3-207ENST00000477299 A0A0U1RQG5 324 aaPredicted RBP17.86■□□□□ 0.45
COPS3-207ENST00000477299 VWA3AA6NCI4 1184 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 ARVCFO00192 962 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 CABYRO75952 493 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 PDIA4P13667 645 aaKnown RBP17.86■□□□□ 0.45
COPS3-207ENST00000477299 RGS19P49795 217 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 JAK3P52333 1124 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 RTP1P59025 263 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 EPHA7Q15375 998 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 ECM1Q16610 540 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 TRAPPC12Q8WVT3 735 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 CLIC6Q96NY7 704 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 EIF2AK1Q9BQI3 630 aaKnown RBP17.86■□□□□ 0.45
COPS3-207ENST00000477299 SH2D3AQ9BRG2 576 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 TRPV6Q9H1D0 765 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 SMARCAD1Q9H4L7 1026 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
COPS3-207ENST00000477299 SETD4Q9NVD3 440 aa17.86■□□□□ 0.45
COPS3-207ENST00000477299 MAFBQ9Y5Q3 323 aaPredicted RBP17.86■□□□□ 0.45
COPS3-207ENST00000477299 MED24O75448 989 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SLITRK3O94933 977 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SPATA31C1P0DKV0 1188 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SMIM10L2AP0DMW4 78 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SMIM10L2BP0DMW5 78 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 CAPN2P17655 700 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SFNP31947 248 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 NASPP49321 788 aaPredicted RBP17.85■□□□□ 0.45
COPS3-207ENST00000477299 FXR2P51116 673 aaKnown RBP eCLIP17.85■□□□□ 0.45
COPS3-207ENST00000477299 TLE2Q04725 743 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SNX17Q15036 470 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SLC39A14Q15043 492 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 FAM47CQ5HY64 1035 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 SPECC1Q5M775 1068 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 ARID2Q68CP9 1835 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 GDF6Q6KF10 455 aaPredicted RBP17.85■□□□□ 0.45
COPS3-207ENST00000477299 PDXDC2PQ6P474 469 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 DTHD1Q6ZMT9 781 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 USP49Q70CQ1 688 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 PLPPR4Q7Z2D5 763 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 IGSF22Q8N9C0 903 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 LINC00301Q8NCQ3 95 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 AFAP1L1Q8TED9 768 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 ZNF396Q96N95 335 aaPredicted RBP17.85■□□□□ 0.45
COPS3-207ENST00000477299 CTAGE1Q96RT6 745 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 AZI2Q9H6S1 392 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 TCEAL9Q9UHQ7 104 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 FBXO2Q9UK22 296 aaPredicted RBP17.85■□□□□ 0.45
COPS3-207ENST00000477299 ATP11BQ9Y2G3 1177 aa17.85■□□□□ 0.45
COPS3-207ENST00000477299 IGSF9BQ9UPX0 1349 aa17.84■□□□□ 0.45
COPS3-207ENST00000477299 PQBP1O60828 265 aaKnown RBP17.84■□□□□ 0.45
COPS3-207ENST00000477299 PRPHP41219 470 aa17.84■□□□□ 0.45
COPS3-207ENST00000477299 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
COPS3-207ENST00000477299 HSD17B14Q9BPX1 270 aa17.84■□□□□ 0.45
COPS3-207ENST00000477299 MMTAG2Q9BU76 263 aaKnown RBP17.84■□□□□ 0.45
COPS3-207ENST00000477299 ERAP1Q9NZ08 941 aa17.84■□□□□ 0.45
COPS3-207ENST00000477299 LRWD1Q9UFC0 647 aa17.84■□□□□ 0.45
COPS3-207ENST00000477299 LOXHD1Q8IVV2 1947 aa17.84■□□□□ 0.45
COPS3-207ENST00000477299 ZBTB42B2RXF5 422 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 LAD1O00515 517 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 B4GALT4O60513 344 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 INSRRP14616 1297 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 IGBP1P78318 339 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 NUCB2P80303 420 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 STK38Q15208 465 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 FAM160B1Q5W0V3 765 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 SH3RF1Q7Z6J0 888 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 CATSPER3Q86XQ3 398 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 TPH2Q8IWU9 490 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 RDM1Q8NG50 284 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 WNT8BQ93098 351 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 LXNQ9BS40 222 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 GDPD2Q9HCC8 539 aa17.83■□□□□ 0.44
COPS3-207ENST00000477299 POTEB3A0JP26 581 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 PRKCEQ02156 737 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 FAAP100Q0VG06 881 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms