RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.87□□□□□ -1.47
PIKFYVE-209ENST00000477200 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
PIKFYVE-209ENST00000477200 MATN2O00339 956 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 GRIA2P42262 883 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 ZNF568Q3ZCX4 644 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 DNAJC10Q8IXB1 793 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 FAM178BQ8IXR5 827 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 LARP4BQ92615 738 aaKnown RBP5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 OR14A2Q96R54 314 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 DPYSL5Q9BPU6 564 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 MMRN2Q9H8L6 949 aa5.86□□□□□ -1.47
PIKFYVE-209ENST00000477200 CENPJQ9HC77 1338 aaPredicted RBP5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 LOC105371045A0A1W2PR82 267 aa5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 COL6A2P12110 1019 aa5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 POLD1P28340 1107 aa5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 TOP3AQ13472 1001 aaPredicted RBP5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 ZNF808Q8N4W9 903 aaPredicted RBP5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 UHMK1Q8TAS1 419 aaKnown RBP5.85□□□□□ -1.47
PIKFYVE-209ENST00000477200 A0A0U1RQG5 324 aaPredicted RBP5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 ESYT3A0FGR9 886 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 ACOT7O00154 380 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 NKRFO15226 690 aaKnown RBP eCLIP5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 CDC14BO60729 498 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 NCLP19338 710 aaKnown RBP5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 ACRV1P26436 265 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 RRADP55042 308 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 HNRNPA0Q13151 305 aaKnown RBP5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 TUBA3CQ13748 450 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 MRM1Q6IN84 353 aaKnown RBP5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 TUBA3EQ6PEY2 450 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 PCSK4Q6UW60 755 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 FAM89AQ96GI7 184 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 AGAP2Q99490 1192 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 PLA2G12BQ9BX93 195 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 GPR27Q9NS67 375 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 STRIP2Q9ULQ0 834 aa5.84□□□□□ -1.47
PIKFYVE-209ENST00000477200 SMAD7O15105 426 aaKnown RBP5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 CALD1Q05682 793 aaKnown RBP5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 TBR1Q16650 682 aa5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 ZNF627Q7L945 461 aa5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 NT5DC4Q86YG4 428 aa5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 ZG16BQ96DA0 208 aa5.83□□□□□ -1.48
PIKFYVE-209ENST00000477200 CUTAO60888 179 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 ADH4P08319 380 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 EPHA5P54756 1037 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 MAP4K2Q12851 820 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 FOXL1Q12952 345 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 HSP90AA2PQ14568 343 aaPredicted RBP5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 ZMAT1Q5H9K5 638 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 HABP4Q5JVS0 413 aaKnown RBP5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 LARP1BQ659C4 914 aaKnown RBP5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 MICAL1Q8TDZ2 1067 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 NAP1L5Q96NT1 182 aaPredicted RBP5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 KCNJ15Q99712 375 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 C12orf65Q9H3J6 166 aaKnown RBP5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 SLC39A2Q9NP94 309 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 NR2E1Q9Y466 385 aa5.82□□□□□ -1.48
PIKFYVE-209ENST00000477200 HDLBPQ00341 1268 aaKnown RBP5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 ZNF483Q8TF39 744 aaPredicted RBP5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 KCTD13Q8WZ19 329 aa5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 CFHR4Q92496 578 aa5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 PHF20Q9BVI0 1012 aa5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 ACTR10Q9NZ32 417 aa5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 BCCIPQ9P287 314 aaKnown RBP eCLIP5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 DSEQ9UL01 958 aa5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 DMRT1Q9Y5R6 373 aa5.81□□□□□ -1.48
PIKFYVE-209ENST00000477200 DLX3O60479 287 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 DDAH1O94760 285 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 GNAT1P11488 350 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 GRK2P25098 689 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 HIBADHP31937 336 aaKnown RBP5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 GRK3P35626 688 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 PPP2R2AP63151 447 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 NFYCQ13952 458 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 KCTD1Q719H9 257 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 MRGPRGQ86SM5 289 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 IPO4Q8TEX9 1081 aaKnown RBP5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 CRAMP1Q96RY5 1269 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 ZNF703Q9H7S9 590 aaPredicted RBP5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 TLR9Q9NR96 1032 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 MRVI1Q9Y6F6 885 aa5.8□□□□□ -1.48
PIKFYVE-209ENST00000477200 PPM1GO15355 546 aaPredicted RBP5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 KRT4P19013 534 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 MAKP20794 623 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 VAMP1P23763 118 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 MSX2P35548 267 aaPredicted RBP5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 RPS19P39019 145 aaKnown RBP5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 ETV4P43268 484 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 SPIRE1Q08AE8 756 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 RSPO2Q6UXX9 243 aaPredicted RBP5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 LBX2Q6XYB7 198 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 USP53Q70EK8 1073 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 LARP4Q71RC2 724 aaKnown RBP eCLIP5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 NPM2Q86SE8 214 aaKnown RBP5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 SCYL1Q96KG9 808 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 IER2Q9BTL4 223 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 PLA2G3Q9NZ20 509 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 CEP72Q9P209 647 aa5.79□□□□□ -1.48
PIKFYVE-209ENST00000477200 NUB1Q9Y5A7 615 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms