RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 HERVK_113Q902F9 699 aa15.21■□□□□ 0.03
ACTN4-205ENST00000477174 SLC5A5Q92911 643 aa15.21■□□□□ 0.03
ACTN4-205ENST00000477174 PCDHA10Q9Y5I2 948 aa15.21■□□□□ 0.03
ACTN4-205ENST00000477174 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 DDX39AO00148 427 aaKnown RBP15.2■□□□□ 0.02
ACTN4-205ENST00000477174 SOX1O00570 391 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-205ENST00000477174 BACH1O14867 736 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 CAND2O75155 1236 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 TDP2O95551 362 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 MARK3P27448 753 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 PPFIA1Q13136 1202 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 LETM2Q2VYF4 491 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 SWSAP1Q6NVH7 229 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 PIK3AP1Q6ZUJ8 805 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 LMBR1Q8WVP7 490 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 TNFRSF25Q93038 417 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 VWCEQ96DN2 955 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 UIMC1Q96RL1 719 aa15.2■□□□□ 0.02
ACTN4-205ENST00000477174 MTIF3Q9H2K0 278 aaKnown RBP15.2■□□□□ 0.02
ACTN4-205ENST00000477174 DDX25Q9UHL0 483 aaKnown RBP15.2■□□□□ 0.02
ACTN4-205ENST00000477174 MBLAC1A4D2B0 266 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-205ENST00000477174 BTBD18B2RXH4 712 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 GAS7O60861 476 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 PSAPP07602 524 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 INSRRP14616 1297 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 THPOP40225 353 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 SMAD3P84022 425 aaKnown RBP15.19■□□□□ 0.02
ACTN4-205ENST00000477174 NR5A1Q13285 461 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 PLCB4Q15147 1175 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 SAFBQ15424 915 aaKnown RBP eCLIP15.19■□□□□ 0.02
ACTN4-205ENST00000477174 GRIK4Q16099 956 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 LRCH2Q5VUJ6 765 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 TAF2Q6P1X5 1199 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 LRRC8DQ7L1W4 858 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
ACTN4-205ENST00000477174 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 LRCH3Q96II8 777 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 C8orf76Q96K31 380 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 ZNF302Q9NR11 478 aa15.19■□□□□ 0.02
ACTN4-205ENST00000477174 MAFBQ9Y5Q3 323 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-205ENST00000477174 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.18■□□□□ 0.02
ACTN4-205ENST00000477174 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.18■□□□□ 0.02
ACTN4-205ENST00000477174 POTEB3A0JP26 581 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 WDR64B1ANS9 1081 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 TBX3O15119 743 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 HBP1O60381 514 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 CCNT1O60563 726 aaKnown RBP15.18■□□□□ 0.02
ACTN4-205ENST00000477174 PSMD10O75832 226 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
ACTN4-205ENST00000477174 ACTN1P12814 892 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 SFNP31947 248 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 GPNMBQ14956 572 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 MARCH8Q5T0T0 291 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 ZNF618Q5T7W0 954 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 PDXDC2PQ6P474 469 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 POTEBQ6S5H4 581 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 OTOP2Q7RTS6 562 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 DEFB128Q7Z7B8 93 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 CCDC60Q8IWA6 550 aaPredicted RBP15.18■□□□□ 0.02
ACTN4-205ENST00000477174 FBXO18Q8NFZ0 1043 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 RDM1Q8NG50 284 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 ETNPPLQ8TBG4 499 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 WNT8BQ93098 351 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 TMX3Q96JJ7 454 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.02
ACTN4-205ENST00000477174 DISC1Q9NRI5 854 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 TRPC6Q9Y210 931 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
ACTN4-205ENST00000477174 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 CXCL10P02778 98 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 JAK3P52333 1124 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 EARS2Q5JPH6 523 aaKnown RBP15.17■□□□□ 0.02
ACTN4-205ENST00000477174 TRAF7Q6Q0C0 670 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 RSPH3Q86UC2 560 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 TUBE1Q9UJT0 475 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 SZT2Q5T011 3432 aa15.17■□□□□ 0.02
ACTN4-205ENST00000477174 SLC37A4O43826 429 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 NBNO60934 754 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 ATP4AP20648 1035 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 FAM109BQ6ICB4 259 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-205ENST00000477174 B3GNT9Q6UX72 402 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-205ENST00000477174 FOXP1Q9H334 677 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-205ENST00000477174 CXXC1Q9P0U4 656 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-205ENST00000477174 PCDHA2Q9Y5H9 948 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 SLC4A7Q9Y6M7 1214 aa15.16■□□□□ 0.02
ACTN4-205ENST00000477174 MARCH6O60337 910 aa15.15■□□□□ 0.02
ACTN4-205ENST00000477174 CD2BP2O95400 341 aaKnown RBP15.15■□□□□ 0.02
ACTN4-205ENST00000477174 BAG4O95429 457 aaKnown RBP15.15■□□□□ 0.02
ACTN4-205ENST00000477174 FOSBP53539 338 aa15.15■□□□□ 0.02
ACTN4-205ENST00000477174 IGBP1P78318 339 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms