RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 RANBP2P49792 3224 aaKnown RBP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 MYH6P13533 1939 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 ADCY6O43306 1168 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 B4GALT4O60513 344 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 NMT2O60551 498 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 TXNP10599 105 aaKnown RBP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 PDHBP11177 359 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 SLC16A2P36021 539 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 CCL23P55773 120 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 PURAQ00577 322 aaKnown RBP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 ZNF543Q08ER8 600 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 ASPRV1Q53RT3 343 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 COX20Q5RI15 118 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 OTOP2Q7RTS6 562 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 MEIOBQ8N635 442 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 SAMD3Q8N6K7 520 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 NSUN6Q8TEA1 469 aaKnown RBP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 IWS1Q96ST2 819 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 KATNAL1Q9BW62 490 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 KRT23Q9C075 422 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 FTOQ9C0B1 505 aaKnown RBP eCLIP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 PRDM12Q9H4Q4 367 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 CNNM2Q9H8M5 875 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 PRDM6Q9NQX0 595 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 PDGFCQ9NRA1 345 aa8.46□□□□□ -1.06
BRCA1-214ENST00000477152 MRPL11Q9Y3B7 192 aaKnown RBP8.46□□□□□ -1.06
BRCA1-214ENST00000477152 ASTN1O14525 1302 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 DHX16O60231 1041 aaKnown RBP8.45□□□□□ -1.06
BRCA1-214ENST00000477152 EFCAB14O75071 495 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 BAIAP3O94812 1187 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 CASTP20810 708 aaKnown RBP8.45□□□□□ -1.06
BRCA1-214ENST00000477152 KCNJ6P48051 423 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 SNAP25P60880 206 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 RPS6P62753 249 aaKnown RBP8.45□□□□□ -1.06
BRCA1-214ENST00000477152 STXBP2Q15833 593 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 IMMTQ16891 758 aaKnown RBP8.45□□□□□ -1.06
BRCA1-214ENST00000477152 KCNV1Q6PIU1 500 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-214ENST00000477152 CAGE1Q8TC20 777 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 PPM1EQ8WY54 764 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 TRPV6Q9H1D0 765 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 MAP3K20Q9NYL2 800 aaKnown RBP8.45□□□□□ -1.06
BRCA1-214ENST00000477152 ZNF232Q9UNY5 417 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 GBF1Q92538 1859 aa8.45□□□□□ -1.06
BRCA1-214ENST00000477152 NFIBO00712 420 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 GH1P01241 217 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 CTSOP43234 321 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 RBM25P49756 843 aaKnown RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 MARSP56192 900 aaKnown RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PSMC6P62333 389 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PRR20EP86478 221 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PRR20CP86479 221 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PRR20DP86480 221 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PRR20BP86481 221 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PRR20AP86496 221 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 TTBK2Q6IQ55 1244 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 OTUD7AQ8TE49 926 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 UBAC1Q9BSL1 405 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 EGFL7Q9UHF1 273 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 SALL3Q9BXA9 1300 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 SZT2Q5T011 3432 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 GRXCR1A8MXD5 290 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 EML1O00423 815 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PARP1P09874 1014 aaKnown RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 SNHG28P0DPA3 235 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 MPSTP25325 297 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 PSMA6P60900 246 aaKnown RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 TRDNQ13061 729 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 NMIQ13287 307 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-214ENST00000477152 VPS53Q5VIR6 699 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 ARHGEF16Q5VV41 709 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 HELQQ8TDG4 1101 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 AFAP1L1Q8TED9 768 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 ASB2Q96Q27 587 aa8.44□□□□□ -1.06
BRCA1-214ENST00000477152 LCTP09848 1927 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 A0A0D9SFI3 127 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 ZBTB39O15060 712 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-214ENST00000477152 SDSP20132 328 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 EDNRBP24530 442 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 NOS2P35228 1153 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 HAND2P61296 217 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 CDC37Q16543 378 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-214ENST00000477152 DGKDQ16760 1214 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 USH1GQ495M9 461 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 SLC30A10Q6XR72 485 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 DEFB128Q7Z7B8 93 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 FBXO11Q86XK2 927 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 CLEC4DQ8WXI8 215 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 COL26A1Q96A83 441 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 FAM227BQ96M60 508 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 ZSCAN10Q96SZ4 725 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-214ENST00000477152 INCENPQ9NQS7 918 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms