RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 LRRC37A2A6NM11 1700 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 TMEM150BA6NC51 233 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 TRIM49BA6NDI0 452 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 WDR64B1ANS9 1081 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 RSPH10B2B2RC85 870 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 RSPH10BP0C881 870 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 ADORA2AP29274 412 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 QARSP47897 775 aaKnown RBP16.09■□□□□ 0.17
COL4A6-206ENST00000477085 CCNA1P78396 465 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 PAK1Q13153 545 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 COBLL1Q53SF7 1204 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 TMEM63BQ5T3F8 832 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 BMP2KQ9NSY1 1161 aaPredicted RBP16.09■□□□□ 0.17
COL4A6-206ENST00000477085 KIAA1217Q5T5P2 1943 aa16.09■□□□□ 0.17
COL4A6-206ENST00000477085 LYPLA2O95372 231 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 ARIH2O95376 493 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 SFNP31947 248 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 JAK3P52333 1124 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 FANCCQ00597 558 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 LRRC41Q15345 812 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 FAM110CQ1W6H9 321 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 CYFIP1Q7L576 1253 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 GPR142Q7Z601 462 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 IFNL1Q8IU54 200 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 SEMA6BQ9H3T3 888 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 JPH1Q9HDC5 661 aaPredicted RBP16.08■□□□□ 0.17
COL4A6-206ENST00000477085 SLC9A2Q9UBY0 812 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 PCDHA10Q9Y5I2 948 aa16.08■□□□□ 0.17
COL4A6-206ENST00000477085 ZNF862O60290 1169 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 STBD1O95210 358 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 UBA1P22314 1058 aaKnown RBP16.08■□□□□ 0.16
COL4A6-206ENST00000477085 ACTR2P61160 394 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 SP4Q02446 784 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 CDKAL1Q5VV42 579 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 TTI2Q6NXR4 508 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 ABHD15Q6UXT9 468 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 CCDC47Q96A33 483 aaKnown RBP16.08■□□□□ 0.16
COL4A6-206ENST00000477085 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
COL4A6-206ENST00000477085 DUSP9Q99956 384 aaKnown RBP16.08■□□□□ 0.16
COL4A6-206ENST00000477085 SH2D3AQ9BRG2 576 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 TBC1D7Q9P0N9 293 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 IFNKQ9P0W0 207 aa16.08■□□□□ 0.16
COL4A6-206ENST00000477085 PSMD2Q13200 908 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 ANKRD40Q6AI12 368 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
COL4A6-206ENST00000477085 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 C4orf19Q8IY42 314 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 ABRAQ8N0Z2 381 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 RDM1Q8NG50 284 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
COL4A6-206ENST00000477085 XPO4Q9C0E2 1151 aaKnown RBP16.07■□□□□ 0.16
COL4A6-206ENST00000477085 ABT1Q9ULW3 272 aaKnown RBP16.07■□□□□ 0.16
COL4A6-206ENST00000477085 DOCK5Q9H7D0 1870 aa16.07■□□□□ 0.16
COL4A6-206ENST00000477085 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 SFI1A8K8P3 1242 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 STRNO43815 780 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 ATG7O95352 703 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 KRT18P05783 430 aaKnown RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 RARRES1P49788 294 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 PSMC5P62195 406 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 GRB14Q14449 540 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 SWSAP1Q6NVH7 229 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 FBXO16Q8IX29 292 aaPredicted RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 SMAP1Q8IYB5 467 aaPredicted RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 MRFAP1L1Q96HT8 127 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 ZCCHC17Q9NP64 241 aaKnown RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 PDGFCQ9NRA1 345 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 INTS13Q9NVM9 706 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
COL4A6-206ENST00000477085 DDX41Q9UJV9 622 aaKnown RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 DBR1Q9UK59 544 aaKnown RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
COL4A6-206ENST00000477085 TMEM88BA6NKF7 163 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 FARP2O94887 1054 aaPredicted RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 PTGS1P23219 599 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 CASP5P51878 434 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 TPM4P67936 248 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 FAM26FQ5R3K3 315 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 C17orf99Q6UX52 265 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 ANO5Q75V66 913 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 P2RX5Q93086 422 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 ZHX3Q9H4I2 956 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 NRBP1Q9UHY1 535 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 PSMA7O14818 248 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 BACH1O14867 736 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 ECM2O94769 699 aaPredicted RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 TGFB3P10600 412 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms