RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 UBA1P22314 1058 aaKnown RBP19.89■□□□□ 0.77
SREBF1-211ENST00000476994 CDK7P50613 346 aa19.89■□□□□ 0.77
SREBF1-211ENST00000476994 FXR2P51116 673 aaKnown RBP eCLIP19.89■□□□□ 0.77
SREBF1-211ENST00000476994 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.89■□□□□ 0.77
SREBF1-211ENST00000476994 SLFN12Q8IYM2 578 aa19.89■□□□□ 0.77
SREBF1-211ENST00000476994 SCFD2Q8WU76 684 aa19.89■□□□□ 0.77
SREBF1-211ENST00000476994 RIT2Q99578 217 aa19.89■□□□□ 0.77
SREBF1-211ENST00000476994 ZNF577Q9BSK1 485 aa19.89■□□□□ 0.77
SREBF1-211ENST00000476994 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-211ENST00000476994 DYNC1LI2O43237 492 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-211ENST00000476994 NKX3-2P78367 333 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 BEX3Q00994 111 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 IGSF22Q8N9C0 903 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 CLIC6Q96NY7 704 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 MTIF3Q9H2K0 278 aaKnown RBP19.88■□□□□ 0.77
SREBF1-211ENST00000476994 PCDHA7Q9UN72 937 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 Q9Y3F1 56 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 LOXHD1Q8IVV2 1947 aa19.88■□□□□ 0.77
SREBF1-211ENST00000476994 UNC80Q8N2C7 3258 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 FOSL2P15408 326 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 PTGS1P23219 599 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 TXKP42681 527 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 EPHB4P54760 987 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 IRX5P78411 483 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-211ENST00000476994 TTLL4Q14679 1199 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 LY6KQ17RY6 165 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 PSRC1Q6PGN9 363 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-211ENST00000476994 KCNV1Q6PIU1 500 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 CXCL17Q6UXB2 119 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 FAM126BQ8IXS8 530 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 MAFAQ8NHW3 353 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-211ENST00000476994 GBP4Q96PP9 640 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 PPP1R12CQ9BZL4 782 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 TTC12Q9H892 705 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-211ENST00000476994 PKD2L1Q9P0L9 805 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 GNEQ9Y223 722 aaKnown RBP19.87■□□□□ 0.77
SREBF1-211ENST00000476994 TELO2Q9Y4R8 837 aa19.87■□□□□ 0.77
SREBF1-211ENST00000476994 CCNE2O96020 404 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 SMPD1P17405 629 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 PPP2R5CQ13362 524 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 ITGA7Q13683 1181 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 BRDTQ58F21 947 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-211ENST00000476994 LRCH2Q5VUJ6 765 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 KRI1Q8N9T8 703 aaKnown RBP19.86■□□□□ 0.77
SREBF1-211ENST00000476994 COPS5Q92905 334 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 TBC1D22BQ9NU19 505 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 ARID2Q68CP9 1835 aa19.86■□□□□ 0.77
SREBF1-211ENST00000476994 VWA3AA6NCI4 1184 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 CTAGE5O15320 804 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 CUTAO60888 179 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 TXNP10599 105 aaKnown RBP19.85■□□□□ 0.77
SREBF1-211ENST00000476994 ARHGAP1Q07960 439 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 DUSP28Q4G0W2 176 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 DTHD1Q6ZMT9 781 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 MYLIPQ8WY64 445 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.85■□□□□ 0.771e-13■■■■□ 21.4
SREBF1-211ENST00000476994 TEKT3Q9BXF9 490 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 CSRNP2Q9H175 543 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 TTYH1Q9H313 450 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-211ENST00000476994 UNC45AQ9H3U1 944 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 PCDHA12Q9UN75 941 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 MYO9BQ13459 2157 aa19.85■□□□□ 0.77
SREBF1-211ENST00000476994 POTEMA6NI47 508 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 EML1O00423 815 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 GAS7O60861 476 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 GGPS1O95749 300 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 CSF2RAP15509 400 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 DNAJB2P25686 324 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 TECP42680 631 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 NEDD9Q14511 834 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 PDIA5Q14554 519 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
SREBF1-211ENST00000476994 SHC4Q6S5L8 630 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 METTL7BQ6UX53 244 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 ZNF579Q8NAF0 562 aaKnown RBP19.84■□□□□ 0.77
SREBF1-211ENST00000476994 EMID1Q96A84 441 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-211ENST00000476994 HIPK3Q9H422 1215 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 LMBRD1Q9NUN5 540 aa19.84■□□□□ 0.77
SREBF1-211ENST00000476994 GADD45BO75293 160 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-211ENST00000476994 LONP1P36776 959 aaKnown RBP19.83■□□□□ 0.77
SREBF1-211ENST00000476994 ME1P48163 572 aa19.83■□□□□ 0.77
SREBF1-211ENST00000476994 CPT1AP50416 773 aa19.83■□□□□ 0.77
SREBF1-211ENST00000476994 ADALQ6DHV7 355 aa19.83■□□□□ 0.77
SREBF1-211ENST00000476994 USP49Q70CQ1 688 aa19.83■□□□□ 0.77
SREBF1-211ENST00000476994 CYFIP1Q7L576 1253 aa19.83■□□□□ 0.77
SREBF1-211ENST00000476994 GIMAP8Q8ND71 665 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-211ENST00000476994 MMTAG2Q9BU76 263 aaKnown RBP19.83■□□□□ 0.77
SREBF1-211ENST00000476994 JPH1Q9HDC5 661 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-211ENST00000476994 FAM237AA0A1B0GTK4 181 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 A0A1W2PQ27 194 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 A0A1W2PQ64 194 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 A0A1W2PQD8 194 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 PP2D1A8MPX8 630 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 DDX39AO00148 427 aaKnown RBP19.82■□□□□ 0.76
SREBF1-211ENST00000476994 NKRFO15226 690 aaKnown RBP eCLIP19.82■□□□□ 0.762e-6■■□□□ 12
SREBF1-211ENST00000476994 CD4P01730 458 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 MCM4P33991 863 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 KRT76Q01546 638 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 TMEM266Q2M3C6 531 aa19.82■□□□□ 0.76
SREBF1-211ENST00000476994 TMEM240Q5SV17 173 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms