RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SWSAP1Q6NVH7 229 aa33.29■■■□□ 2.92
HOXB3-208ENST00000476342 TNPO1Q92973 898 aaKnown RBP33.29■■■□□ 2.92
HOXB3-208ENST00000476342 TNRC18O15417 2968 aaPredicted RBP33.29■■■□□ 2.92
HOXB3-208ENST00000476342 MARK3P27448 753 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 HDAC6Q9UBN7 1215 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 GTF2IRD1Q9UHL9 959 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 PDE4DIPQ5VU43 2346 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 KAT6AQ92794 2004 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 PTGDRQ13258 359 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 PDXDC2PQ6P474 469 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 PPP1R13LQ8WUF5 828 aa33.28■■■□□ 2.92
HOXB3-208ENST00000476342 CLTBP09497 229 aa33.27■■■□□ 2.92
HOXB3-208ENST00000476342 RNPEPQ9H4A4 650 aa33.27■■■□□ 2.92
HOXB3-208ENST00000476342 GABBR1Q9UBS5 961 aa33.27■■■□□ 2.92
HOXB3-208ENST00000476342 MAFBQ9Y5Q3 323 aaPredicted RBP33.27■■■□□ 2.92
HOXB3-208ENST00000476342 IGSF9BQ9UPX0 1349 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 B4GALT4O60513 344 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 SMIM10L2AP0DMW4 78 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 SMIM10L2BP0DMW5 78 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 ZSCAN22P10073 491 aaPredicted RBP33.26■■■□□ 2.91
HOXB3-208ENST00000476342 SPIRE1Q08AE8 756 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 TMEM266Q2M3C6 531 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 NCAPH2Q6IBW4 605 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 PRKAG2Q9UGJ0 569 aa33.26■■■□□ 2.91
HOXB3-208ENST00000476342 BMP15O95972 392 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 CD4P01730 458 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 C4orf32Q8N8J7 132 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 ATP6V0A1Q93050 837 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 CEP131Q9UPN4 1083 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 TRPC6Q9Y210 931 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 NOD1Q9Y239 953 aa33.25■■■□□ 2.91
HOXB3-208ENST00000476342 C17orf102A2RUQ5 167 aa33.24■■■□□ 2.91
HOXB3-208ENST00000476342 EML1O00423 815 aa33.24■■■□□ 2.91
HOXB3-208ENST00000476342 GNAT1P11488 350 aa33.24■■■□□ 2.91
HOXB3-208ENST00000476342 FAAP100Q0VG06 881 aa33.24■■■□□ 2.91
HOXB3-208ENST00000476342 EPHA7Q15375 998 aa33.24■■■□□ 2.91
HOXB3-208ENST00000476342 TRPV6Q9H1D0 765 aa33.24■■■□□ 2.91
HOXB3-208ENST00000476342 TRMT13Q9NUP7 481 aaKnown RBP33.24■■■□□ 2.91
HOXB3-208ENST00000476342 NRCAMQ92823 1304 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 POTEB3A0JP26 581 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 PRPHP41219 470 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 PLCB4Q15147 1175 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 PTGISQ16647 500 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 GDF6Q6KF10 455 aaPredicted RBP33.23■■■□□ 2.91
HOXB3-208ENST00000476342 POTEBQ6S5H4 581 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 CKAP2LQ8IYA6 745 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 FAM167AQ96KS9 214 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 PRDM5Q9NQX1 630 aaPredicted RBP33.23■■■□□ 2.91
HOXB3-208ENST00000476342 PDLIM7Q9NR12 457 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 MYH15Q9Y2K3 1946 aa33.23■■■□□ 2.91
HOXB3-208ENST00000476342 ATP2C1P98194 919 aaPredicted RBP33.22■■■□□ 2.91
HOXB3-208ENST00000476342 PPFIA1Q13136 1202 aa33.22■■■□□ 2.91
HOXB3-208ENST00000476342 ATP8B4Q8TF62 1192 aa33.22■■■□□ 2.91
HOXB3-208ENST00000476342 TMEM39AQ9NV64 488 aa33.22■■■□□ 2.91
HOXB3-208ENST00000476342 DAXXQ9UER7 740 aaPredicted RBP33.22■■■□□ 2.91
HOXB3-208ENST00000476342 DKC1O60832 514 aaKnown RBP eCLIP33.21■■■□□ 2.91
HOXB3-208ENST00000476342 F13A1P00488 732 aa33.21■■■□□ 2.91
HOXB3-208ENST00000476342 TECP42680 631 aa33.21■■■□□ 2.91
HOXB3-208ENST00000476342 BBXQ8WY36 941 aaPredicted RBP33.21■■■□□ 2.91
HOXB3-208ENST00000476342 RAB34Q9BZG1 259 aa33.21■■■□□ 2.91
HOXB3-208ENST00000476342 POTEMA6NI47 508 aa33.2■■■□□ 2.91
HOXB3-208ENST00000476342 HBP1O60381 514 aa33.2■■■□□ 2.91
HOXB3-208ENST00000476342 P4HBP07237 508 aaKnown RBP33.2■■■□□ 2.91
HOXB3-208ENST00000476342 HOXC8P31273 242 aa33.2■■■□□ 2.91
HOXB3-208ENST00000476342 FXR2P51116 673 aaKnown RBP eCLIP33.2■■■□□ 2.91
HOXB3-208ENST00000476342 PKP1Q13835 747 aa33.2■■■□□ 2.91
HOXB3-208ENST00000476342 FOXD4L5Q5VV16 416 aaPredicted RBP33.2■■■□□ 2.91
HOXB3-208ENST00000476342 FOXD4L4Q8WXT5 416 aaPredicted RBP33.2■■■□□ 2.91
HOXB3-208ENST00000476342 SETD4Q9NVD3 440 aa33.2■■■□□ 2.91
HOXB3-208ENST00000476342 TRIP12Q14669 1992 aaPredicted RBP33.2■■■□□ 2.91
HOXB3-208ENST00000476342 QARSP47897 775 aaKnown RBP33.19■■■□□ 2.9
HOXB3-208ENST00000476342 PSMC5P62195 406 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 SF3A1Q15459 793 aaKnown RBP33.19■■■□□ 2.9
HOXB3-208ENST00000476342 UGCGQ16739 394 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 FAM173BQ6P4H8 233 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 DTHD1Q6ZMT9 781 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 BANK1Q8NDB2 785 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 NEK9Q8TD19 979 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 LMBR1Q8WVP7 490 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 RRN3P2A6NIE6 340 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 ATP4AP20648 1035 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 PRKCEQ02156 737 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 GRIK4Q16099 956 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 ARL6IP4Q66PJ3 421 aaKnown RBP33.19■■■□□ 2.9
HOXB3-208ENST00000476342 TBX21Q9UL17 535 aa33.19■■■□□ 2.9
HOXB3-208ENST00000476342 OATP04181 439 aa33.18■■■□□ 2.9
HOXB3-208ENST00000476342 INSRRP14616 1297 aa33.18■■■□□ 2.9
HOXB3-208ENST00000476342 ERMNQ8TAM6 284 aa33.18■■■□□ 2.9
HOXB3-208ENST00000476342 NRBP2Q9NSY0 501 aa33.18■■■□□ 2.9
HOXB3-208ENST00000476342 ZMYND8Q9ULU4 1186 aaPredicted RBP33.18■■■□□ 2.9
HOXB3-208ENST00000476342 KIAA0355O15063 1070 aa33.17■■■□□ 2.9
HOXB3-208ENST00000476342 ZNF862O60290 1169 aa33.17■■■□□ 2.9
HOXB3-208ENST00000476342 TRMT1LQ7Z2T5 733 aaKnown RBP33.17■■■□□ 2.9
HOXB3-208ENST00000476342 SH3RF1Q7Z6J0 888 aa33.17■■■□□ 2.9
HOXB3-208ENST00000476342 EIF2AK1Q9BQI3 630 aaKnown RBP33.17■■■□□ 2.9
HOXB3-208ENST00000476342 LXNQ9BS40 222 aa33.17■■■□□ 2.9
HOXB3-208ENST00000476342 COL1A2P08123 1366 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 BRD1O95696 1058 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 SYN1P17600 705 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 ZNF200P98182 395 aaPredicted RBP33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms