RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 TRIM59Q8IWR1 403 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 PSMD1Q99460 953 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 FAM53CQ9NYF3 392 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 MRPL11Q9Y3B7 192 aaKnown RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 COL2A1P02458 1487 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 SHTN1A0MZ66 631 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ZNF185O15231 689 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 POLR3GO15318 223 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 FAM13AO94988 1023 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CAP2P40123 477 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 MAGEA1P43355 309 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 KCNH2Q12809 1159 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 BRD3Q15059 726 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 LONRF2Q1L5Z9 754 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 FOXR2Q6PJQ5 311 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 LDHDQ86WU2 507 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 MYCT1Q8N699 235 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 MMS19Q96T76 1030 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ZNF577Q9BSK1 485 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ZNF341Q9BYN7 854 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 RANBP17Q9H2T7 1088 aaKnown RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 SH2D4AQ9H788 454 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CEP72Q9P209 647 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ZNRF3Q9ULT6 936 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 SYNPO2Q9UMS6 1093 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CCDC151A5D8V7 595 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CLIC2O15247 247 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CALUO43852 315 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 TACC1O75410 805 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 EYA4O95677 639 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 RASSF7Q02833 373 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 DMTNQ08495 405 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 OTOP1Q7RTM1 612 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 DEFB132Q7Z7B7 95 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 AGBL1Q96MI9 1066 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 PSMB7Q99436 277 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 POLR3CQ9BUI4 534 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 EHMT1Q9H9B1 1298 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ARMCX3Q9UH62 379 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CCPG1Q9ULG6 757 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 CAPN6Q9Y6Q1 641 aa9.84□□□□□ -0.83
CCDC66-216ENST00000476142 ZNF646O15015 1829 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-216ENST00000476142 TNS1Q9HBL0 1735 aaKnown RBP9.83□□□□□ -0.84
CCDC66-216ENST00000476142 COL4A5P29400 1685 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 NOL4O94818 638 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 ARP10275 920 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 ACTN1P12814 892 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 KCNA1Q09470 495 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 EDRF1Q3B7T1 1238 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 ZNF662Q6ZS27 426 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 CPXCR1Q8N123 301 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 HOMER2Q9NSB8 354 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
CCDC66-216ENST00000476142 FAM184BQ9ULE4 1060 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 BUB1O43683 1085 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 ERLIN1O75477 346 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 SLITRK3O94933 977 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 HOXD13P35453 343 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 PRELPP51888 382 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 VSNL1P62760 191 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 GABPB1Q06547 395 aaPredicted RBP9.83□□□□□ -0.84
CCDC66-216ENST00000476142 CXCL9Q07325 125 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 DGKZQ13574 1117 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 CEP55Q53EZ4 464 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 PAPD7Q5XG87 772 aaKnown RBP9.83□□□□□ -0.84
CCDC66-216ENST00000476142 RINT1Q6NUQ1 792 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 POTEAQ6S8J7 498 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 FAM160B2Q86V87 743 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 FAM133AQ8N9E0 248 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 TRIM58Q8NG06 486 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 ALS2CR12Q96Q35 445 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 IKZF4Q9H2S9 585 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 FEM1BQ9UK73 627 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 PCDHB13Q9Y5F0 798 aa9.83□□□□□ -0.84
CCDC66-216ENST00000476142 WNT10BO00744 389 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 PSMD10O75832 226 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 NR3C1P04150 777 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 SERPING1P05155 500 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 XRCC5P13010 732 aaKnown RBP9.82□□□□□ -0.84
CCDC66-216ENST00000476142 KCNA3P22001 575 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 NMT1P30419 496 aaKnown RBP9.82□□□□□ -0.84
CCDC66-216ENST00000476142 INPP5BP32019 993 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 TUBB4BP68371 445 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 CKAP4Q07065 602 aaKnown RBP9.82□□□□□ -0.84
CCDC66-216ENST00000476142 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
CCDC66-216ENST00000476142 ZC2HC1CQ53FD0 456 aaPredicted RBP9.82□□□□□ -0.84
CCDC66-216ENST00000476142 HGSNATQ68CP4 663 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 KSR1Q8IVT5 923 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 MSANTD4Q8NCY6 345 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 SLC5A5Q92911 643 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 HOOK2Q96ED9 719 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 PURBQ96QR8 312 aaKnown RBP9.82□□□□□ -0.84
CCDC66-216ENST00000476142 HSD17B14Q9BPX1 270 aa9.82□□□□□ -0.84
CCDC66-216ENST00000476142 UNC45AQ9H3U1 944 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms