RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 SF3A3Q12874 501 aaKnown RBP eCLIP6.6□□□□□ -1.355e-7■■■□□ 17.2
HNRNPU-208ENST00000475997 CALCRLQ16602 461 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 GNPTABQ3T906 1256 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 HAUS3Q68CZ6 603 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 SMIM5Q71RC9 77 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TRMT1LQ7Z2T5 733 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 FAM186BQ8IYM0 893 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 CNOT6LQ96LI5 555 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 CHP1Q99653 195 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 IFT122Q9HBG6 1241 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DCP1AQ9NPI6 582 aaPredicted RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TRPC5Q9UL62 973 aaPredicted RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 EXOC7Q9UPT5 735 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 MAD1L1Q9Y6D9 718 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TTC26A0AVF1 554 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 EIF3CLB5ME19 914 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 GNGT2O14610 69 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 SEMA3EO15041 775 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DAPK3O43293 454 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DEAF1O75398 565 aaPredicted RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 KRT8P05787 483 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 EEF1GP26641 437 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ATP6V1E1P36543 226 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TRPC1P48995 793 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 RCAN1P53805 252 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 BIRC3Q13489 604 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 GRAMD1BQ3KR37 738 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TRIM65Q6PJ69 517 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 NELFCDQ8IXH7 590 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 NSMCE1Q8WV22 266 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 FAM84BQ96KN1 310 aaPredicted RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 FGD4Q96M96 766 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 EIF3CQ99613 913 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 PHF20Q9BVI0 1012 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 GLT8D2Q9H1C3 349 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 PFDN6O15212 129 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 FOXP2O15409 715 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 CD44P16070 742 aaKnown RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 PLCG2P16885 1265 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 BMP6P22004 513 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ADCY8P40145 1251 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ATP2C1P98194 919 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 NEK8Q86SG6 692 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 TEX2Q8IWB9 1127 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ANLNQ9NQW6 1124 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 KRT82Q9NSB4 513 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 BSDC1Q9NW68 430 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 MID2Q9UJV3 735 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 RGPD1P0DJD0 1748 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 NFAT5O94916 1531 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 CFAP73A6NFT4 308 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 KCNK3O14649 394 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 RASGRF2O14827 1237 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 MAPK13O15264 365 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 SRGAP2O75044 1071 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 GSTA1P08263 222 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 GSTA2P09210 222 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ESRRAP11474 423 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 HSPA6P17066 643 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 PPARDQ03181 441 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 CASP8Q14790 479 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 PFKFB3Q16875 520 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 HERC4Q5GLZ8 1057 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ARL6IP4Q66PJ3 421 aaKnown RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 SESTD1Q86VW0 696 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 MB21D1Q8N884 522 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 RSAD2Q8WXG1 361 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 C10orf88Q9H8K7 445 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 STMN3Q9NZ72 180 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 TCRBV5S4A2TA0A5A2 114 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 SMIM22K7EJ46 135 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 PLCG1P19174 1290 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 PDE6BP35913 854 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 PLA2G4AP47712 749 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 DPYDQ12882 1025 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ATG16L1Q676U5 607 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 USP17L2Q6R6M4 530 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 APLFQ8IW19 511 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 SLC44A5Q8NCS7 719 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 P2RX5Q93086 422 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 C8orf37Q96NL8 207 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 TRIM15Q9C019 465 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 MRPL40Q9NQ50 206 aaKnown RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ZNF219Q9P2Y4 722 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 FHOD1Q9Y613 1164 aa6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 FRMPD2Q68DX3 1309 aaPredicted RBP6.59□□□□□ -1.35
HNRNPU-208ENST00000475997 ZBBXA8MT70 800 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 ATF2P15336 505 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 NR1D1P20393 614 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 FGFR2P21802 821 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 HOXA7P31268 230 aaPredicted RBP6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 STAT1P42224 750 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 IFNAR2P48551 515 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 SMTNP53814 917 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 RCN2Q14257 317 aa6.59□□□□□ -1.36
HNRNPU-208ENST00000475997 CEP55Q53EZ4 464 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms