RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 FAM47CQ5HY64 1035 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 FAM160B1Q5W0V3 765 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 C7orf31Q8N865 590 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 GLG1Q92896 1179 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 CDX2Q99626 313 aaPredicted RBP17.07■□□□□ 0.32
SNX13-207ENST00000475800 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 UNC80Q8N2C7 3258 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 CCNE2O96020 404 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 PSAPP07602 524 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 FAAP100Q0VG06 881 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 CALCRLQ16602 461 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 TTC38Q5R3I4 469 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 ABHD15Q6UXT9 468 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 PLPPR4Q7Z2D5 763 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 BRAPQ7Z569 592 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 MYLIPQ8WY64 445 aa17.06■□□□□ 0.32
SNX13-207ENST00000475800 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
SNX13-207ENST00000475800 BACH1O14867 736 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 CD4P01730 458 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 GNAT1P11488 350 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 SYT1P21579 422 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 STAT5BP51692 787 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 CHMP4BP1P59074 171 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 FPGSQ05932 587 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 FAM109BQ6ICB4 259 aaPredicted RBP17.05■□□□□ 0.32
SNX13-207ENST00000475800 TRIM50Q86XT4 487 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 SEMA6BQ9H3T3 888 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 GTF2IRD1Q9UHL9 959 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 SAMM50Q9Y512 469 aa17.05■□□□□ 0.32
SNX13-207ENST00000475800 MCM7P33993 719 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 PPP2R5CQ13362 524 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 HAS1Q92839 578 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 UIMC1Q96RL1 719 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 TTYH1Q9H313 450 aaPredicted RBP17.04■□□□□ 0.32
SNX13-207ENST00000475800 UNC45AQ9H3U1 944 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 HDAC6Q9UBN7 1215 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 NOD1Q9Y239 953 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
SNX13-207ENST00000475800 NRCAMQ92823 1304 aa17.03■□□□□ 0.32
SNX13-207ENST00000475800 B4GALT4O60513 344 aa17.03■□□□□ 0.32
SNX13-207ENST00000475800 B3GNT9Q6UX72 402 aa17.03■□□□□ 0.32
SNX13-207ENST00000475800 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX13-207ENST00000475800 PCYT2Q99447 389 aa17.03■□□□□ 0.32
SNX13-207ENST00000475800 PCDHA12Q9UN75 941 aa17.03■□□□□ 0.32
SNX13-207ENST00000475800 C17orf102A2RUQ5 167 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 LAD1O00515 517 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 CHMP2AO43633 222 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 STX6O43752 255 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 OR52Z1P0C646 297 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 SMIM10L2AP0DMW4 78 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 SMIM10L2BP0DMW5 78 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 ACRP10323 421 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 ZNF174Q15697 407 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 PTGISQ16647 500 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 SWSAP1Q6NVH7 229 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 PDXDC2PQ6P474 469 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.32
SNX13-207ENST00000475800 CCDC155Q8N6L0 562 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 ATP6V0A1Q93050 837 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 FAM167AQ96KS9 214 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 MTMR9Q96QG7 549 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 VAV3Q9UKW4 847 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 TBX21Q9UL17 535 aa17.02■□□□□ 0.32
SNX13-207ENST00000475800 MAFBQ9Y5Q3 323 aaPredicted RBP17.02■□□□□ 0.32
SNX13-207ENST00000475800 IGSF9BQ9UPX0 1349 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 RRN3P2A6NIE6 340 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 WNT7AO00755 349 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 HBP1O60381 514 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 DKC1O60832 514 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX13-207ENST00000475800 BMP15O95972 392 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 TIMP1P01033 207 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 MARK3P27448 753 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 HOXC8P31273 242 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
SNX13-207ENST00000475800 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
SNX13-207ENST00000475800 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
SNX13-207ENST00000475800 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 MAFAQ8NHW3 353 aaPredicted RBP17.01■□□□□ 0.31
SNX13-207ENST00000475800 GJA10Q969M2 543 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX13-207ENST00000475800 TRPV6Q9H1D0 765 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 RNPEPQ9H4A4 650 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
SNX13-207ENST00000475800 TTC12Q9H892 705 aaPredicted RBP17.01■□□□□ 0.31
SNX13-207ENST00000475800 TRMT13Q9NUP7 481 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms