RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
ABCF3-211ENST00000475728 PSRC1Q6PGN9 363 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-211ENST00000475728 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 RDM1Q8NG50 284 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 TNFRSF25Q93038 417 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 ATP6V0A1Q93050 837 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 COL25A1Q9BXS0 654 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-211ENST00000475728 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-211ENST00000475728 TELO2Q9Y4R8 837 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 SAMM50Q9Y512 469 aa16.33■□□□□ 0.2
ABCF3-211ENST00000475728 IGKV6D-21A0A0A0MT36 114 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 CAND2O75155 1236 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
ABCF3-211ENST00000475728 BAG4O95429 457 aaKnown RBP16.32■□□□□ 0.2
ABCF3-211ENST00000475728 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
ABCF3-211ENST00000475728 GUCY1B3Q02153 619 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 RBL2Q08999 1139 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 LTBP2Q14767 1821 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 Q7L0L9 218 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 SERINC5Q86VE9 423 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 MTIF3Q9H2K0 278 aaKnown RBP16.32■□□□□ 0.2
ABCF3-211ENST00000475728 RNPEPQ9H4A4 650 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 IL23AQ9NPF7 189 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 ZNF302Q9NR11 478 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 SMC3Q9UQE7 1217 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
ABCF3-211ENST00000475728 PSMD10O75832 226 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 CSF2RAP15509 400 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 SELPP16109 830 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 MARK3P27448 753 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 CCL23P55773 120 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 FAM167AQ96KS9 214 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 PCYT2Q99447 389 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 WNT8AQ9H1J5 351 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 SETD4Q9NVD3 440 aa16.31■□□□□ 0.2
ABCF3-211ENST00000475728 UNC80Q8N2C7 3258 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 UMODL1Q5DID0 1318 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 POTEB3A0JP26 581 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 SLC37A4O43826 429 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 HBP1O60381 514 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-211ENST00000475728 GRIK4Q16099 956 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 LRIT3Q3SXY7 679 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 EARS2Q5JPH6 523 aaKnown RBP16.3■□□□□ 0.2
ABCF3-211ENST00000475728 SWSAP1Q6NVH7 229 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 TAF2Q6P1X5 1199 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 POTEBQ6S5H4 581 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 RSPH3Q86UC2 560 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 ATP8B4Q8TF62 1192 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 LMBR1Q8WVP7 490 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
ABCF3-211ENST00000475728 NOL7Q9UMY1 257 aaKnown RBP16.3■□□□□ 0.2
ABCF3-211ENST00000475728 TREHO43280 583 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 CKBP12277 381 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 GJB2P29033 226 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 ADAM17P78536 824 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 ZNF200P98182 395 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-211ENST00000475728 PLCB4Q15147 1175 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 SHHQ15465 462 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 MIER3Q7Z3K6 550 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 CCDC60Q8IWA6 550 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-211ENST00000475728 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 DEFB123Q8N688 67 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
ABCF3-211ENST00000475728 RNPC3Q96LT9 517 aaKnown RBP16.29■□□□□ 0.2
ABCF3-211ENST00000475728 UNC45AQ9H3U1 944 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 TUBE1Q9UJT0 475 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 MAFBQ9Y5Q3 323 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-211ENST00000475728 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
ABCF3-211ENST00000475728 COL1A2P08123 1366 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 H3BQV1 296 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 CHMP2AO43633 222 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 NEMFO60524 1076 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 DKC1O60832 514 aaKnown RBP eCLIP16.28■□□□□ 0.2
ABCF3-211ENST00000475728 FGBP02675 491 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 ACTN1P12814 892 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 INSRRP14616 1297 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 THPOP40225 353 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 EPHB4P54760 987 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 CUL4AQ13619 759 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 TRIM71Q2Q1W2 868 aaKnown RBP16.28■□□□□ 0.2
ABCF3-211ENST00000475728 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 TMEM240Q5SV17 173 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-211ENST00000475728 SCLYQ96I15 445 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
ABCF3-211ENST00000475728 MBLAC1A4D2B0 266 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms