RNA–Protein interactions for RNA: ENST00000475548.5

SMTN-216, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-216ENST00000475548 NCAPH2Q6IBW4 605 aa20■□□□□ 0.79
SMTN-216ENST00000475548 CCDC60Q8IWA6 550 aaPredicted RBP20■□□□□ 0.79
SMTN-216ENST00000475548 C7orf31Q8N865 590 aa20■□□□□ 0.79
SMTN-216ENST00000475548 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
SMTN-216ENST00000475548 ZNF396Q96N95 335 aaPredicted RBP20■□□□□ 0.79
SMTN-216ENST00000475548 GABBR1Q9UBS5 961 aa20■□□□□ 0.79
SMTN-216ENST00000475548 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
SMTN-216ENST00000475548 EML1O00423 815 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 FAM47CQ5HY64 1035 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 ARL6IP4Q66PJ3 421 aaKnown RBP19.99■□□□□ 0.79
SMTN-216ENST00000475548 PDXDC2PQ6P474 469 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 DTHD1Q6ZMT9 781 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 SESTD1Q86VW0 696 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 RAB34Q9BZG1 259 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 ZDHHC9Q9Y397 364 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 MAFBQ9Y5Q3 323 aaPredicted RBP19.99■□□□□ 0.79
SMTN-216ENST00000475548 CLIC4Q9Y696 253 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 WDR81Q562E7 1941 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 MYH15Q9Y2K3 1946 aa19.99■□□□□ 0.79
SMTN-216ENST00000475548 DDIT3P35638 169 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 FXR2P51116 673 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMTN-216ENST00000475548 RTP1P59025 263 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 PDIA5Q14554 519 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 ANKRD33Q7Z3H0 272 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 ATP6V0A1Q93050 837 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 TOX2Q96NM4 488 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 RNPEPQ9H4A4 650 aa19.98■□□□□ 0.79
SMTN-216ENST00000475548 DKC1O60832 514 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMTN-216ENST00000475548 P4HBP07237 508 aaKnown RBP19.97■□□□□ 0.79
SMTN-216ENST00000475548 MARK3P27448 753 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 TRIM60Q495X7 471 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 ATL3Q6DD88 541 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 USP28Q96RU2 1077 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 HDAC6Q9UBN7 1215 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 ATP11BQ9Y2G3 1177 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 ATP6V1DQ9Y5K8 247 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 IGSF9BQ9UPX0 1349 aa19.97■□□□□ 0.79
SMTN-216ENST00000475548 POTEB3A0JP26 581 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 POTEMA6NI47 508 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 DCDC2CA8MYV0 355 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 TLR3O15455 904 aaKnown RBP19.96■□□□□ 0.79
SMTN-216ENST00000475548 SMIM10L2AP0DMW4 78 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 SMIM10L2BP0DMW5 78 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 QARSP47897 775 aaKnown RBP19.96■□□□□ 0.79
SMTN-216ENST00000475548 PSMC5P62195 406 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 CEBPZQ03701 1054 aaKnown RBP19.96■□□□□ 0.79
SMTN-216ENST00000475548 TLE2Q04725 743 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 PLCB4Q15147 1175 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 POTEBQ6S5H4 581 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 CKAP2LQ8IYA6 745 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 ERMNQ8TAM6 284 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 NEK9Q8TD19 979 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 DPF3Q92784 378 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 FTOQ9C0B1 505 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMTN-216ENST00000475548 LRWD1Q9UFC0 647 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 GTF2IRD1Q9UHL9 959 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 STK24Q9Y6E0 443 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 KAT6AQ92794 2004 aa19.96■□□□□ 0.79
SMTN-216ENST00000475548 HBP1O60381 514 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 EVI5O60447 810 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 PQBP1O60828 265 aaKnown RBP19.95■□□□□ 0.78
SMTN-216ENST00000475548 GNAT1P11488 350 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 PTPAQ15257 358 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 IL17AQ16552 155 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 FAM126BQ8IXS8 530 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 IGSF22Q8N9C0 903 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 BANK1Q8NDB2 785 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 ATP8B4Q8TF62 1192 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 PPP1R13LQ8WUF5 828 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 BBXQ8WY36 941 aaPredicted RBP19.95■□□□□ 0.78
SMTN-216ENST00000475548 FAM167AQ96KS9 214 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 EIF2AK1Q9BQI3 630 aaKnown RBP19.95■□□□□ 0.78
SMTN-216ENST00000475548 NRBP2Q9NSY0 501 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
SMTN-216ENST00000475548 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 CIZ1Q9ULV3 898 aaPredicted RBP19.95■□□□□ 0.78
SMTN-216ENST00000475548 TRPC6Q9Y210 931 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 MORC2Q9Y6X9 1032 aaPredicted RBP19.95■□□□□ 0.78
SMTN-216ENST00000475548 NRCAMQ92823 1304 aa19.95■□□□□ 0.78
SMTN-216ENST00000475548 ALPK3Q96L96 1907 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 C17orf102A2RUQ5 167 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 SLITRK3O94933 977 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 ATP4AP20648 1035 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 NASPP49321 788 aaPredicted RBP19.94■□□□□ 0.78
SMTN-216ENST00000475548 PPFIA1Q13136 1202 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 SLC39A14Q15043 492 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 UGCGQ16739 394 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 FOXD4L6Q3SYB3 417 aaPredicted RBP19.94■□□□□ 0.78
SMTN-216ENST00000475548 FOXD4L3Q6VB84 417 aaPredicted RBP19.94■□□□□ 0.78
SMTN-216ENST00000475548 DYDC2Q96IM9 177 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 HSD17B14Q9BPX1 270 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 ZSWIM4Q9H7M6 989 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 PCDH10Q9P2E7 1040 aa19.94■□□□□ 0.78
SMTN-216ENST00000475548 MKI67P46013 3256 aaKnown RBP19.94■□□□□ 0.78
SMTN-216ENST00000475548 VWA3AA6NCI4 1184 aa19.93■□□□□ 0.78
SMTN-216ENST00000475548 RRN3P2A6NIE6 340 aa19.93■□□□□ 0.78
SMTN-216ENST00000475548 ZNF862O60290 1169 aa19.93■□□□□ 0.78
SMTN-216ENST00000475548 B4GALT4O60513 344 aa19.93■□□□□ 0.78
SMTN-216ENST00000475548 YEATS4O95619 227 aa19.93■□□□□ 0.78
SMTN-216ENST00000475548 CD4P01730 458 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms