RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
ATG9A-220ENST00000475339 AOC1P19801 751 aa16.35■□□□□ 0.21
ATG9A-220ENST00000475339 SDSP20132 328 aa16.35■□□□□ 0.21
ATG9A-220ENST00000475339 MFAP1P55081 439 aaKnown RBP16.35■□□□□ 0.21
ATG9A-220ENST00000475339 COL9A2Q14055 689 aaPredicted RBP16.35■□□□□ 0.21
ATG9A-220ENST00000475339 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
ATG9A-220ENST00000475339 TMEM184AQ6ZMB5 413 aa16.35■□□□□ 0.21
ATG9A-220ENST00000475339 DCLK2Q8N568 766 aa16.35■□□□□ 0.21
ATG9A-220ENST00000475339 CDCA3Q99618 268 aaPredicted RBP16.35■□□□□ 0.21
ATG9A-220ENST00000475339 EHMT1Q9H9B1 1298 aa16.35■□□□□ 0.21
ATG9A-220ENST00000475339 NPR3P17342 541 aa16.34■□□□□ 0.21
ATG9A-220ENST00000475339 NOVP48745 357 aa16.34■□□□□ 0.21
ATG9A-220ENST00000475339 ERVFC1P60507 584 aa16.34■□□□□ 0.21
ATG9A-220ENST00000475339 KCNC3Q14003 757 aa16.34■□□□□ 0.21
ATG9A-220ENST00000475339 LPIN1Q14693 890 aa16.34■□□□□ 0.21
ATG9A-220ENST00000475339 ARHGEF16Q5VV41 709 aa16.34■□□□□ 0.21
ATG9A-220ENST00000475339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
ATG9A-220ENST00000475339 GGPS1O95749 300 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 NR3C2P08235 984 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 SRGAP2BP0DMP2 458 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.2
ATG9A-220ENST00000475339 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.2
ATG9A-220ENST00000475339 POMKQ9H5K3 350 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 LIMD1Q9UGP4 676 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 CCDC171Q6TFL3 1326 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.2
ATG9A-220ENST00000475339 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
ATG9A-220ENST00000475339 LGALS2P05162 132 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 PDHBP11177 359 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 GATMP50440 423 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 SP2Q02086 613 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 CRIPAKQ8N1N5 446 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 LINC01599Q8WXQ3 324 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 RUBCNQ92622 972 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
ATG9A-220ENST00000475339 TOP1P11387 765 aaKnown RBP16.31■□□□□ 0.2
ATG9A-220ENST00000475339 GNAT1P11488 350 aa16.31■□□□□ 0.2
ATG9A-220ENST00000475339 HOXB8P17481 243 aaPredicted RBP16.31■□□□□ 0.2
ATG9A-220ENST00000475339 UBE3AQ05086 875 aa16.31■□□□□ 0.2
ATG9A-220ENST00000475339 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
ATG9A-220ENST00000475339 RTN4RL1Q86UN2 441 aaPredicted RBP16.31■□□□□ 0.2
ATG9A-220ENST00000475339 ZNF589Q86UQ0 364 aaPredicted RBP16.31■□□□□ 0.2
ATG9A-220ENST00000475339 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
ATG9A-220ENST00000475339 ADAM17P78536 824 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 ZNF543Q08ER8 600 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 VPS53Q5VIR6 699 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 LMBR1Q8WVP7 490 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 RTP3Q9BQQ7 232 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 PXMP2Q9NR77 195 aa16.3■□□□□ 0.2
ATG9A-220ENST00000475339 FSCN2O14926 492 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 FGF18O76093 207 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 ATXN1P54253 815 aaKnown RBP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 MGAT3Q09327 533 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 PLPP4Q5VZY2 271 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 NPAS4Q8IUM7 802 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 RIN2Q8WYP3 895 aaPredicted RBP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 NECTIN4Q96NY8 510 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 FASNP49327 2511 aaKnown RBP16.29■□□□□ 0.2
ATG9A-220ENST00000475339 FAM208BQ5VWN6 2430 aa16.29■□□□□ 0.2
ATG9A-220ENST00000475339 WEE2P0C1S8 567 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 CES5AQ6NT32 575 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 TRIM50Q86XT4 487 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 MCF2L2Q86YR7 1114 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 ZDHHC14Q8IZN3 488 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
ATG9A-220ENST00000475339 MAF1Q9H063 256 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 ADAM7Q9H2U9 754 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 ERVK-5Q9HDB9 667 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
ATG9A-220ENST00000475339 ABCB11O95342 1321 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 HIDE1A8MVS5 230 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 FOXP2O15409 715 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
ATG9A-220ENST00000475339 CD52P31358 61 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 ALX1Q15699 326 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
ATG9A-220ENST00000475339 KIAA0319Q5VV43 1072 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
ATG9A-220ENST00000475339 SIX5Q8N196 739 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 TDRD5Q8NAT2 981 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms