RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 WNT8BQ93098 351 aa18.66■□□□□ 0.58
ATG4B-216ENST00000475195 SCLYQ96I15 445 aa18.66■□□□□ 0.58
ATG4B-216ENST00000475195 AZI2Q9H6S1 392 aa18.66■□□□□ 0.58
ATG4B-216ENST00000475195 LAMA2P24043 3122 aaKnown RBP18.65■□□□□ 0.58
ATG4B-216ENST00000475195 BTBD18B2RXH4 712 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 FGBP02675 491 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 SELPP16109 830 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 GCFC2P16383 781 aaKnown RBP18.65■□□□□ 0.58
ATG4B-216ENST00000475195 MARCH8Q5T0T0 291 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 PSRC1Q6PGN9 363 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-216ENST00000475195 PIK3AP1Q6ZUJ8 805 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 ETNPPLQ8TBG4 499 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 HERVK_113Q902F9 699 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
ATG4B-216ENST00000475195 TMX3Q96JJ7 454 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 NAP1L4Q99733 375 aaKnown RBP18.65■□□□□ 0.58
ATG4B-216ENST00000475195 BRMS1Q9HCU9 246 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 PCDHA10Q9Y5I2 948 aa18.65■□□□□ 0.58
ATG4B-216ENST00000475195 MAFBQ9Y5Q3 323 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-216ENST00000475195 KAT6AQ92794 2004 aa18.64■□□□□ 0.58
ATG4B-216ENST00000475195 MBLAC1A4D2B0 266 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-216ENST00000475195 RRN3P2A6NIE6 340 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 DDX39AO00148 427 aaKnown RBP18.64■□□□□ 0.57
ATG4B-216ENST00000475195 ACRP10323 421 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 ATP4AP20648 1035 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 TRIM29Q14134 588 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 PLCB4Q15147 1175 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 MIS18BP1Q6P0N0 1132 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 CCDC60Q8IWA6 550 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-216ENST00000475195 DIS3L2Q8IYB7 885 aaKnown RBP18.64■□□□□ 0.57
ATG4B-216ENST00000475195 FBXO18Q8NFZ0 1043 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 LMBR1Q8WVP7 490 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 KCNMB3Q9NPA1 279 aa18.64■□□□□ 0.57
ATG4B-216ENST00000475195 DDX25Q9UHL0 483 aaKnown RBP18.64■□□□□ 0.57
ATG4B-216ENST00000475195 TBX3O15119 743 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 CAND2O75155 1236 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 CXCL10P02778 98 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 INSRRP14616 1297 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 FAM160B1Q5W0V3 765 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 SWSAP1Q6NVH7 229 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 LRRC8DQ7L1W4 858 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 LRCH3Q96II8 777 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 FAM20AQ96MK3 541 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 UIMC1Q96RL1 719 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 ZNF302Q9NR11 478 aa18.63■□□□□ 0.57
ATG4B-216ENST00000475195 SCN5AQ14524 2016 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 POTEB3A0JP26 581 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 WDR64B1ANS9 1081 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 SLC37A4O43826 429 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 GAS7O60861 476 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 PSAPP07602 524 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 MARK3P27448 753 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 SFNP31947 248 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 PPFIA1Q13136 1202 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 GRIK4Q16099 956 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 ZNF618Q5T7W0 954 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 LRCH2Q5VUJ6 765 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 POTEBQ6S5H4 581 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 RDM1Q8NG50 284 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 C8orf76Q96K31 380 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
ATG4B-216ENST00000475195 TEKT3Q9BXF9 490 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 TANC1Q9C0D5 1861 aa18.62■□□□□ 0.57
ATG4B-216ENST00000475195 FAM205CA6NFA0 338 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 HBP1O60381 514 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 CCNT1O60563 726 aaKnown RBP18.61■□□□□ 0.57
ATG4B-216ENST00000475195 SMAD3P84022 425 aaKnown RBP18.61■□□□□ 0.57
ATG4B-216ENST00000475195 FAM26DQ5JW98 314 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 TAF2Q6P1X5 1199 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 ATP8B4Q8TF62 1192 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 HAS1Q92839 578 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 GJA10Q969M2 543 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 FOXP1Q9H334 677 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-216ENST00000475195 UNC45AQ9H3U1 944 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 DISC1Q9NRI5 854 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 TET1Q8NFU7 2136 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 WDR81Q562E7 1941 aa18.61■□□□□ 0.57
ATG4B-216ENST00000475195 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-216ENST00000475195 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-216ENST00000475195 BACH1O14867 736 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 NBNO60934 754 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 JAK3P52333 1124 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 MBTPS1Q14703 1052 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 SAFBQ15424 915 aaKnown RBP eCLIP18.6■□□□□ 0.57
ATG4B-216ENST00000475195 PDXDC2PQ6P474 469 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 FAM184AQ8NB25 1140 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 TCEAL9Q9UHQ7 104 aa18.6■□□□□ 0.57
ATG4B-216ENST00000475195 MYH9P35579 1960 aaKnown RBP18.59■□□□□ 0.57
ATG4B-216ENST00000475195 COL1A2P08123 1366 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 RSPH10B2B2RC85 870 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 RPLP2P05387 115 aaKnown RBP18.59■□□□□ 0.57
ATG4B-216ENST00000475195 RSPH10BP0C881 870 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 THPOP40225 353 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 PPP2R5CQ13362 524 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 ZNF484Q5JVG2 852 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 FAM109BQ6ICB4 259 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-216ENST00000475195 OTOP2Q7RTS6 562 aa18.59■□□□□ 0.57
ATG4B-216ENST00000475195 DEFB128Q7Z7B8 93 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms