RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 FAM20AQ96MK3 541 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 INPP4AQ96PE3 977 aaPredicted RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 AGO4Q9HCK5 861 aaKnown RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 LRWD1Q9UFC0 647 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 VAV3Q9UKW4 847 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 IPO5O00410 1097 aaKnown RBP23.12■■□□□ 1.29
SMIM11A-204ENST00000474455 STX10O60499 249 aa23.12■■□□□ 1.29
SMIM11A-204ENST00000474455 SETQ01105 290 aaPredicted RBP23.12■■□□□ 1.29
SMIM11A-204ENST00000474455 PNOCQ13519 176 aa23.12■■□□□ 1.29
SMIM11A-204ENST00000474455 NPLOC4Q8TAT6 608 aa23.12■■□□□ 1.29
SMIM11A-204ENST00000474455 EML1O00423 815 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 DHX15O43143 795 aaKnown RBP23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 SORBS3O60504 671 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 PDIA5Q14554 519 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 ECM1Q16610 540 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 TMEM266Q2M3C6 531 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 LRCH2Q5VUJ6 765 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 SEPT14Q6ZU15 432 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 OTOP1Q7RTM1 612 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 NIPA1Q7RTP0 329 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 DPP9Q86TI2 863 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 TMEM139Q8IV31 216 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 ABRAQ8N0Z2 381 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 TRIML1Q8N9V2 468 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 MLKLQ8NB16 471 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 RNF186Q9NXI6 227 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 TELO2Q9Y4R8 837 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 MAP2K2P36507 400 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 PDE4DQ08499 809 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 CT47A1Q5JQC4 288 aaPredicted RBP23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 XRRA1Q6P2D8 792 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 CALCOCO1Q9P1Z2 691 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 SERTAD1Q9UHV2 236 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 PPP2R2CQ9Y2T4 447 aa23.11■■□□□ 1.29
SMIM11A-204ENST00000474455 HTTP42858 3142 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 CHMP2AO43633 222 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 URI1O94763 535 aaPredicted RBP23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 SP2Q02086 613 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 MORN1Q5T089 497 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 NT5DC1Q5TFE4 455 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 NCAPH2Q6IBW4 605 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 CABP7Q86V35 215 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 LRRN4CLQ8ND94 238 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 DHX58Q96C10 678 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 FANCLQ9NW38 375 aa23.1■■□□□ 1.29
SMIM11A-204ENST00000474455 FOXN1O15353 648 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 EIF3JO75822 258 aaKnown RBP23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 UBA7P41226 1012 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 ENOX1Q8TC92 643 aaKnown RBP23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 AK8Q96MA6 479 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 BAG1Q99933 345 aaPredicted RBP23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 UNC45AQ9H3U1 944 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 PCDHA5Q9Y5H7 936 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 BRCA2P51587 3418 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 SLC15A5A6NIM6 579 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 GAS7O60861 476 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 CASQ1P31415 396 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 MDM2Q00987 491 aaPredicted RBP23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 TEX35Q5T0J7 233 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 TMEM63BQ5T3F8 832 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 ISM2Q6H9L7 571 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 KANK3Q6NY19 840 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 FBXO16Q8IX29 292 aaPredicted RBP23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 GPR161Q8N6U8 529 aaKnown RBP23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 GPRASP2Q96D09 838 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 CCSER1Q9C0I3 900 aa23.09■■□□□ 1.29
SMIM11A-204ENST00000474455 PLA2G4AP47712 749 aa23.08■■□□□ 1.29
SMIM11A-204ENST00000474455 ARMCX2Q7L311 632 aa23.08■■□□□ 1.29
SMIM11A-204ENST00000474455 NLRX1Q86UT6 975 aa23.08■■□□□ 1.29
SMIM11A-204ENST00000474455 GRAMD1CQ8IYS0 662 aa23.08■■□□□ 1.29
SMIM11A-204ENST00000474455 MAML3Q96JK9 1138 aa23.08■■□□□ 1.29
SMIM11A-204ENST00000474455 GJD2Q9UKL4 321 aa23.08■■□□□ 1.29
SMIM11A-204ENST00000474455 SPATA31C2B4DYI2 1134 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 ACTN4O43707 911 aaKnown RBP23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 KCNA2P16389 499 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 CYP2C19P33261 490 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 E2F4Q16254 413 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 REM2Q8IYK8 340 aaPredicted RBP23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 SNX29Q8TEQ0 813 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 STAMQ92783 540 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 PNMA5Q96PV4 448 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 PDGFCQ9NRA1 345 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 FLRT1Q9NZU1 646 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 TNPO2O14787 897 aaKnown RBP23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 ZNF18P17022 549 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 LACTBP83111 547 aaPredicted RBP23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 GRB10Q13322 594 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 NAALADL2Q58DX5 795 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 SPECC1LQ69YQ0 1117 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 B3GNT9Q6UX72 402 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 MORC4Q8TE76 937 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 TRIM47Q96LD4 638 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 CARD6Q9BX69 1037 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 DISC1Q9NRI5 854 aa23.07■■□□□ 1.28
SMIM11A-204ENST00000474455 THSD7BQ9C0I4 1608 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 MED24O75448 989 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 STAM2O75886 525 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 ARIH2O95376 493 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms