RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 CCL23P55773 120 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 INF2Q27J81 1249 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 MOXD1Q6UVY6 613 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 CAGE1Q8TC20 777 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 SNX27Q96L92 541 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 LRFN3Q9BTN0 628 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 ERAP1Q9NZ08 941 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 MYO9BQ13459 2157 aa12.2□□□□□ -0.46
RNF220-210ENST00000474394 CYP3A7-CYP3A51PA0A087WV96 503 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 DHX15O43143 795 aaKnown RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 EDIL3O43854 480 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 ATG7O95352 703 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 MMP1P03956 469 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 CYP3A7P24462 503 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 MCM2P49736 904 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 FOSBP53539 338 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 EPHB4P54760 987 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 PTK7Q13308 1070 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 Q4G0T1 1027 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 KRT40Q6A162 431 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 MIS18BP1Q6P0N0 1132 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 PSRC1Q6PGN9 363 aaPredicted RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 LENG9Q96B70 501 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 CTAGE1Q96RT6 745 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
RNF220-210ENST00000474394 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 RNPEPQ9H4A4 650 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 IL23AQ9NPF7 189 aa12.19□□□□□ -0.46
RNF220-210ENST00000474394 NRCAMQ92823 1304 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 BACH1O14867 736 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 MSH4O15457 936 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 GAS7O60861 476 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 TDP2O95551 362 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 CCNE2O96020 404 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
RNF220-210ENST00000474394 MARK3P27448 753 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 HOXC8P31273 242 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 RFC2P35250 354 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 STAT5BP51692 787 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 ZNF200P98182 395 aaPredicted RBP12.18□□□□□ -0.46
RNF220-210ENST00000474394 KRT76Q01546 638 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 SAFBQ15424 915 aaKnown RBP eCLIP12.18□□□□□ -0.46
RNF220-210ENST00000474394 LETM2Q2VYF4 491 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 FAM160B1Q5W0V3 765 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 ZNF746Q6NUN9 644 aaPredicted RBP12.18□□□□□ -0.46
RNF220-210ENST00000474394 ABHD15Q6UXT9 468 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 SMAP1Q8IYB5 467 aaPredicted RBP12.18□□□□□ -0.46
RNF220-210ENST00000474394 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 TIFAQ96CG3 184 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 SCLYQ96I15 445 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 C8orf76Q96K31 380 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 MBOAT7Q96N66 472 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 IPO9Q96P70 1041 aaKnown RBP12.18□□□□□ -0.46
RNF220-210ENST00000474394 PCYT2Q99447 389 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 RIT2Q99578 217 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 SETD4Q9NVD3 440 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
RNF220-210ENST00000474394 KAT6AQ92794 2004 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 IGKV6D-21A0A0A0MT36 114 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 PARNO95453 639 aaKnown RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 FGBP02675 491 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 PFKMP08237 780 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 IQCF3P0C7M6 154 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 ACRP10323 421 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 SELPP16109 830 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 SLC26A2P50443 739 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 RBL2Q08999 1139 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 PPFIA1Q13136 1202 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 NR5A1Q13285 461 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 HIC1Q14526 733 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 TMEM240Q5SV17 173 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 ZNF365Q70YC5 407 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 C16orf59Q7L2K0 433 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 SERINC5Q86VE9 423 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 DIS3L2Q8IYB7 885 aaKnown RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 LMBR1Q8WVP7 490 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 DHX38Q92620 1227 aaKnown RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 SLC5A5Q92911 643 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.17□□□□□ -0.464e-8■■□□□ 12
RNF220-210ENST00000474394 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 MTIF3Q9H2K0 278 aaKnown RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 ZNF302Q9NR11 478 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 DDX25Q9UHL0 483 aaKnown RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms