RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 TCEAL9Q9UHQ7 104 aa22.77■■□□□ 1.24
CDHR3-210ENST00000474330 A0A087WWV3 80 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 E9PMD0 336 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 SFNP31947 248 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 JAK3P52333 1124 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 IRF5Q13568 498 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 MORN1Q5T089 497 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 RDM1Q8NG50 284 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 SOCS4Q8WXH5 440 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 LRRC27Q9C0I9 530 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 DNAJC25Q9H1X3 360 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 GRPEL1Q9HAV7 217 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 SLC5A4Q9NY91 659 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 DNM3Q9UQ16 869 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 DOCK5Q9H7D0 1870 aa22.76■■□□□ 1.23
CDHR3-210ENST00000474330 MRE11P49959 708 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 MORC3Q14149 939 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 KCNV1Q6PIU1 500 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 TRIM9Q9C026 710 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 WDR64B1ANS9 1081 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 CCNE2O96020 404 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 MYCP01106 439 aaPredicted RBP22.75■■□□□ 1.23
CDHR3-210ENST00000474330 P4HBP07237 508 aaKnown RBP22.75■■□□□ 1.23
CDHR3-210ENST00000474330 SP2Q02086 613 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 MAP2K5Q13163 448 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 CTTNQ14247 550 aaKnown RBP22.75■■□□□ 1.23
CDHR3-210ENST00000474330 DPCR1Q3MIW9 517 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 ISM2Q6H9L7 571 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 TPH2Q8IWU9 490 aa22.75■■□□□ 1.23
CDHR3-210ENST00000474330 ADCY3O60266 1144 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 RPN1P04843 607 aaKnown RBP22.74■■□□□ 1.23
CDHR3-210ENST00000474330 PLA2G4BP0C869 781 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 ELNP15502 786 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 DHX8Q14562 1220 aaKnown RBP22.74■■□□□ 1.23
CDHR3-210ENST00000474330 MTFR1Q15390 333 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 CNNM4Q6P4Q7 775 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 MAMDC4Q6UXC1 1216 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 ARMCX2Q7L311 632 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 EEPD1Q7L9B9 569 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 SMAP1Q8IYB5 467 aaPredicted RBP22.74■■□□□ 1.23
CDHR3-210ENST00000474330 RNF214Q8ND24 703 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 GIMAP8Q8ND71 665 aaPredicted RBP22.74■■□□□ 1.23
CDHR3-210ENST00000474330 FAM200AQ8TCP9 573 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 PXYLP1Q8TE99 480 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 JPH1Q9HDC5 661 aaPredicted RBP22.74■■□□□ 1.23
CDHR3-210ENST00000474330 SLC9A2Q9UBY0 812 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 SAMM50Q9Y512 469 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 WDR81Q562E7 1941 aa22.74■■□□□ 1.23
CDHR3-210ENST00000474330 LOXHD1Q8IVV2 1947 aa22.73■■□□□ 1.23
CDHR3-210ENST00000474330 MYMKA6NI61 221 aa22.73■■□□□ 1.23
CDHR3-210ENST00000474330 BMP6P22004 513 aa22.73■■□□□ 1.23
CDHR3-210ENST00000474330 ZNF165P49910 485 aa22.73■■□□□ 1.23
CDHR3-210ENST00000474330 PSMC6P62333 389 aa22.73■■□□□ 1.23
CDHR3-210ENST00000474330 C11orf57Q6ZUT1 292 aaPredicted RBP22.73■■□□□ 1.23
CDHR3-210ENST00000474330 SYT2Q8N9I0 419 aaPredicted RBP22.73■■□□□ 1.23
CDHR3-210ENST00000474330 RMND1Q9NWS8 449 aa22.73■■□□□ 1.23
CDHR3-210ENST00000474330 KLRC4O43908 158 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 SLC12A3P55017 1021 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 MLLT1Q03111 559 aaPredicted RBP22.72■■□□□ 1.23
CDHR3-210ENST00000474330 NEDD9Q14511 834 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 KCNB1Q14721 858 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 L1TD1Q5T7N2 865 aaKnown RBP22.72■■□□□ 1.23
CDHR3-210ENST00000474330 SLAIN1Q8ND83 568 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 USP6NLQ92738 828 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 MAML3Q96JK9 1138 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 NACC1Q96RE7 527 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 LXNQ9BS40 222 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 NAT10Q9H0A0 1025 aaKnown RBP22.72■■□□□ 1.23
CDHR3-210ENST00000474330 BCAS3Q9H6U6 928 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 ZSWIM4Q9H7M6 989 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 PCDHA10Q9Y5I2 948 aa22.72■■□□□ 1.23
CDHR3-210ENST00000474330 EYA4O95677 639 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 HOXC6P09630 235 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 UBA1P22314 1058 aaKnown RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 RGS2P41220 211 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 QARSP47897 775 aaKnown RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 BANK1Q8NDB2 785 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 WRAP73Q9P2S5 460 aaPredicted RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 DDX41Q9UJV9 622 aaKnown RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 LYPLA2O95372 231 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 EN2P19622 333 aaPredicted RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 CYFIP1Q7L576 1253 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 FBXO16Q8IX29 292 aaPredicted RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 MSL3Q8N5Y2 521 aaKnown RBP22.71■■□□□ 1.23
CDHR3-210ENST00000474330 MLKLQ8NB16 471 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 CBX8Q9HC52 389 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 VTA1Q9NP79 307 aa22.71■■□□□ 1.23
CDHR3-210ENST00000474330 PVALEFA0A1B0GWK0 134 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 SSBP05455 408 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDHR3-210ENST00000474330 ACTR2P61160 394 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 ASIC1P78348 528 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 CCDC62Q6P9F0 684 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 DDX12PQ92771 950 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 APBA2Q99767 749 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 BPIFA3Q9BQP9 254 aa22.7■■□□□ 1.22
CDHR3-210ENST00000474330 BMP2KQ9NSY1 1161 aaPredicted RBP22.7■■□□□ 1.22
CDHR3-210ENST00000474330 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.7■■□□□ 1.22
CDHR3-210ENST00000474330 FARP2O94887 1054 aaPredicted RBP22.69■■□□□ 1.22
CDHR3-210ENST00000474330 RHOBTB3O94955 611 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms