RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CCDC188H7C350 402 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 SMNDC1O75940 238 aaKnown RBP eCLIP20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 TECP42680 631 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 EIF3BP55884 814 aaKnown RBP20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 KCNJ2P63252 427 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 SLMAPQ14BN4 828 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 CAPRIN2Q6IMN6 1127 aaKnown RBP20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 TMED8Q6PL24 325 aaPredicted RBP20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 GLIS3Q8NEA6 775 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 MTFR1LQ9H019 292 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 ADAM7Q9H2U9 754 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 ABCF3Q9NUQ8 709 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 DIAPH2O60879 1101 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 ELAC2Q9BQ52 826 aaKnown RBP20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 SELENOSQ9BQE4 189 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 SAMD15Q9P1V8 674 aa20.32■□□□□ 0.84
ECHDC1-214ENST00000474289 NUP98P52948 1817 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 CASZ1Q86V15 1759 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 BTNL10A8MVZ5 291 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 PPFIA2O75334 1257 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 MMP13P45452 471 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 MIS18BP1Q6P0N0 1132 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 SV2BQ7L1I2 683 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 SLITRK6Q9H5Y7 841 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 SHBGP04278 402 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 LRRC41Q15345 812 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 HOOK3Q86VS8 718 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 DAGLBQ8NCG7 672 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 MICAL1Q8TDZ2 1067 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 TXLNGYQ9BZA5 131 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 BLOC1S4Q9NUP1 217 aa20.31■□□□□ 0.84
ECHDC1-214ENST00000474289 CCNT1O60563 726 aaKnown RBP20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 NQO1P15559 274 aaKnown RBP20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 ALDH5A1P51649 535 aaPredicted RBP20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 LETM2Q2VYF4 491 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 HEATR3Q7Z4Q2 680 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 DZIP3Q86Y13 1208 aaKnown RBP20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 DNAAF5Q86Y56 855 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 CALML4Q96GE6 196 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 FMO2Q99518 471 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 FAM114A2Q9NRY5 505 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 SLC5A4Q9NY91 659 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 AIPL1Q9NZN9 384 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 COL4A3BPQ9Y5P4 624 aa20.3■□□□□ 0.84
ECHDC1-214ENST00000474289 PVALEFA0A1B0GWK0 134 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 CCDC26Q8TAB7 109 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 TRIM31Q9BZY9 425 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 EPB41L4BQ9H329 900 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 KANSL2Q9H9L4 492 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 UTP11Q9Y3A2 253 aaKnown RBP20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 CACNA1SQ13698 1873 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 WTIPA6NIX2 430 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 NCALDP61601 193 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 ATP8B4Q8TF62 1192 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 TSG101Q99816 390 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 SH3GL3Q99963 347 aa20.29■□□□□ 0.84
ECHDC1-214ENST00000474289 UBOX5O94941 541 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 RARAP10276 462 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 ASIC2Q16515 512 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 ZNF34Q8IZ26 560 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 PRMT1Q99873 361 aaKnown RBP20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 TRIM51Q9BSJ1 452 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 KLHL33A6NCF5 533 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 ENO4A6NNW6 628 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 PTK2Q05397 1052 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 GRB10Q13322 594 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 RASGEF1CQ8N431 466 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 A0A1B0GUL6 1792 aa20.28■□□□□ 0.84
ECHDC1-214ENST00000474289 STXBP3O00186 592 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 VIMP08670 466 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 MAP2K1Q02750 393 aaPredicted RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 SPDYCQ5MJ68 293 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 PROM2Q8N271 834 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 PARD3BQ8TEW8 1205 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 LARP4BQ92615 738 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 CNKSR1Q969H4 720 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 RIC8AQ9NPQ8 531 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 INTS9Q9NV88 658 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 GGT7Q9UJ14 662 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 CORO1CQ9ULV4 474 aaPredicted RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 NHSL1Q5SYE7 1610 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 TSPY2A6NKD2 308 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 NUDT17P0C025 328 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 CCND1P24385 295 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 FKBP3Q00688 224 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 POU5F1Q01860 360 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 IFI16Q16666 785 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 ZCWPW2Q504Y3 356 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 GALNT17Q6IS24 598 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 TPCN2Q8NHX9 752 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 PGM2Q96G03 612 aa20.27■□□□□ 0.84
ECHDC1-214ENST00000474289 BARHL2Q9NY43 387 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms