RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 DOCK5Q9H7D0 1870 aa23.25■■□□□ 1.31
APP-215ENST00000474136 GRM4Q14833 912 aa23.25■■□□□ 1.31
APP-215ENST00000474136 FBXO47Q5MNV8 452 aa23.25■■□□□ 1.31
APP-215ENST00000474136 SPPL3Q8TCT6 385 aa23.25■■□□□ 1.31
APP-215ENST00000474136 PIBF1Q8WXW3 757 aa23.25■■□□□ 1.31
APP-215ENST00000474136 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
APP-215ENST00000474136 AGO3Q9H9G7 860 aaKnown RBP23.25■■□□□ 1.31
APP-215ENST00000474136 BAZ2BQ9UIF8 2168 aaKnown RBP23.25■■□□□ 1.31
APP-215ENST00000474136 STAM2O75886 525 aa23.24■■□□□ 1.31
APP-215ENST00000474136 PTPN5P54829 565 aa23.24■■□□□ 1.31
APP-215ENST00000474136 TCF15Q12870 199 aa23.24■■□□□ 1.31
APP-215ENST00000474136 PPFIA1Q13136 1202 aa23.24■■□□□ 1.31
APP-215ENST00000474136 TAF2Q6P1X5 1199 aa23.24■■□□□ 1.31
APP-215ENST00000474136 SMRP1Q8NCR6 262 aa23.24■■□□□ 1.31
APP-215ENST00000474136 DNAJB3Q8WWF6 145 aa23.24■■□□□ 1.31
APP-215ENST00000474136 ZBTB10Q96DT7 871 aa23.24■■□□□ 1.31
APP-215ENST00000474136 SENP2Q9HC62 589 aa23.24■■□□□ 1.31
APP-215ENST00000474136 PCDHGC5Q9Y5F6 944 aa23.24■■□□□ 1.31
APP-215ENST00000474136 CDY2AQ9Y6F7 541 aa23.24■■□□□ 1.31
APP-215ENST00000474136 USP34Q70CQ2 3546 aa23.24■■□□□ 1.31
APP-215ENST00000474136 PNMA6FA0A0J9YX94 578 aa23.23■■□□□ 1.31
APP-215ENST00000474136 LOC730098B7Z3J9 87 aa23.23■■□□□ 1.31
APP-215ENST00000474136 MARK3P27448 753 aa23.23■■□□□ 1.31
APP-215ENST00000474136 TCF7P36402 384 aaPredicted RBP23.23■■□□□ 1.31
APP-215ENST00000474136 TTC3P53804 2025 aa23.23■■□□□ 1.31
APP-215ENST00000474136 ZXDAP98168 799 aa23.23■■□□□ 1.31
APP-215ENST00000474136 TRAF1Q13077 416 aa23.23■■□□□ 1.31
APP-215ENST00000474136 RBM23Q86U06 439 aaKnown RBP23.23■■□□□ 1.31
APP-215ENST00000474136 RTN4RL1Q86UN2 441 aaPredicted RBP23.23■■□□□ 1.31
APP-215ENST00000474136 EFHBQ8N7U6 833 aa23.23■■□□□ 1.31
APP-215ENST00000474136 KLHL23Q8NBE8 558 aa23.23■■□□□ 1.31
APP-215ENST00000474136 P2RX5Q93086 422 aa23.23■■□□□ 1.31
APP-215ENST00000474136 BARX2Q9UMQ3 279 aaPredicted RBP23.23■■□□□ 1.31
APP-215ENST00000474136 ZDBF2Q9HCK1 2354 aa23.23■■□□□ 1.31
APP-215ENST00000474136 GLP2RO95838 553 aa23.22■■□□□ 1.31
APP-215ENST00000474136 CD52P31358 61 aa23.22■■□□□ 1.31
APP-215ENST00000474136 NRIP1P48552 1158 aa23.22■■□□□ 1.31
APP-215ENST00000474136 GRIK4Q16099 956 aa23.22■■□□□ 1.31
APP-215ENST00000474136 PAN2Q504Q3 1202 aaKnown RBP23.22■■□□□ 1.31
APP-215ENST00000474136 TSHZ1Q6ZSZ6 1077 aa23.22■■□□□ 1.31
APP-215ENST00000474136 RSPH3Q86UC2 560 aa23.22■■□□□ 1.31
APP-215ENST00000474136 POF1BQ8WVV4 589 aa23.22■■□□□ 1.31
APP-215ENST00000474136 SENP7Q9BQF6 1050 aa23.22■■□□□ 1.31
APP-215ENST00000474136 IL25Q9H293 177 aa23.22■■□□□ 1.31
APP-215ENST00000474136 TUBE1Q9UJT0 475 aa23.22■■□□□ 1.31
APP-215ENST00000474136 USP15Q9Y4E8 981 aaPredicted RBP23.22■■□□□ 1.31
APP-215ENST00000474136 ATP9AO75110 1047 aa23.21■■□□□ 1.31
APP-215ENST00000474136 COASYQ13057 564 aa23.21■■□□□ 1.31
APP-215ENST00000474136 MARCH8Q5T0T0 291 aa23.21■■□□□ 1.31
APP-215ENST00000474136 USP17L6PQ6QN14 398 aa23.21■■□□□ 1.31
APP-215ENST00000474136 SUGP1Q8IWZ8 645 aaKnown RBP23.21■■□□□ 1.31
APP-215ENST00000474136 CMTR2Q8IYT2 770 aaKnown RBP23.21■■□□□ 1.31
APP-215ENST00000474136 CRIPAKQ8N1N5 446 aa23.21■■□□□ 1.31
APP-215ENST00000474136 PPP2R3CQ969Q6 453 aa23.21■■□□□ 1.31
APP-215ENST00000474136 UPF2Q9HAU5 1272 aaKnown RBP23.21■■□□□ 1.31
APP-215ENST00000474136 FAM86C1Q9NVL1 165 aa23.21■■□□□ 1.31
APP-215ENST00000474136 REC8O95072 547 aa23.2■■□□□ 1.3
APP-215ENST00000474136 GATMP50440 423 aa23.2■■□□□ 1.3
APP-215ENST00000474136 IGBP1P78318 339 aa23.2■■□□□ 1.3
APP-215ENST00000474136 CBX2Q14781 532 aaPredicted RBP23.2■■□□□ 1.3
APP-215ENST00000474136 PCNX4Q63HM2 1172 aa23.2■■□□□ 1.3
APP-215ENST00000474136 GSTTP1A0A1W2PQM5 241 aa23.19■■□□□ 1.3
APP-215ENST00000474136 MBLAC1A4D2B0 266 aaPredicted RBP23.19■■□□□ 1.3
APP-215ENST00000474136 ST18O60284 1047 aa23.19■■□□□ 1.3
APP-215ENST00000474136 MRPS6P82932 125 aaKnown RBP23.19■■□□□ 1.3
APP-215ENST00000474136 NAALADL2Q58DX5 795 aa23.19■■□□□ 1.3
APP-215ENST00000474136 FBXL6Q8N531 539 aa23.19■■□□□ 1.3
APP-215ENST00000474136 ESYT1Q9BSJ8 1104 aa23.19■■□□□ 1.3
APP-215ENST00000474136 FAM49AQ9H0Q0 323 aaPredicted RBP23.19■■□□□ 1.3
APP-215ENST00000474136 IFIT3O14879 490 aaKnown RBP23.18■■□□□ 1.3
APP-215ENST00000474136 EPB41L2O43491 1005 aaKnown RBP23.18■■□□□ 1.3
APP-215ENST00000474136 VCPP55072 806 aaKnown RBP23.18■■□□□ 1.3
APP-215ENST00000474136 RBM10P98175 930 aaKnown RBP23.18■■□□□ 1.3
APP-215ENST00000474136 NLRX1Q86UT6 975 aa23.18■■□□□ 1.3
APP-215ENST00000474136 NPAS4Q8IUM7 802 aa23.18■■□□□ 1.3
APP-215ENST00000474136 SMARCC2Q8TAQ2 1214 aa23.18■■□□□ 1.3
APP-215ENST00000474136 RPGRIP1Q96KN7 1286 aa23.18■■□□□ 1.3
APP-215ENST00000474136 PPFIA3O75145 1194 aa23.17■■□□□ 1.3
APP-215ENST00000474136 KCNA2P16389 499 aa23.17■■□□□ 1.3
APP-215ENST00000474136 TMEM62Q0P6H9 643 aa23.17■■□□□ 1.3
APP-215ENST00000474136 TROAPQ12815 778 aa23.17■■□□□ 1.3
APP-215ENST00000474136 PKN1Q16512 942 aa23.17■■□□□ 1.3
APP-215ENST00000474136 SEPT1Q8WYJ6 367 aa23.17■■□□□ 1.3
APP-215ENST00000474136 GLG1Q92896 1179 aa23.17■■□□□ 1.3
APP-215ENST00000474136 PRRX2Q99811 253 aa23.17■■□□□ 1.3
APP-215ENST00000474136 PHF7Q9BWX1 381 aaPredicted RBP23.17■■□□□ 1.3
APP-215ENST00000474136 ERAP1Q9NZ08 941 aa23.17■■□□□ 1.3
APP-215ENST00000474136 PKD2L1Q9P0L9 805 aa23.17■■□□□ 1.3
APP-215ENST00000474136 CFAP54Q96N23 3096 aa23.17■■□□□ 1.3
APP-215ENST00000474136 KAT6AQ92794 2004 aa23.16■■□□□ 1.3
APP-215ENST00000474136 MEIS2O14770 477 aa23.16■■□□□ 1.3
APP-215ENST00000474136 PER2O15055 1255 aa23.16■■□□□ 1.3
APP-215ENST00000474136 SGSM2O43147 1006 aa23.16■■□□□ 1.3
APP-215ENST00000474136 IBSPP21815 317 aaPredicted RBP23.16■■□□□ 1.3
APP-215ENST00000474136 GIMAP8Q8ND71 665 aaPredicted RBP23.16■■□□□ 1.3
APP-215ENST00000474136 CACNA1HO95180 2353 aa23.15■■□□□ 1.3
APP-215ENST00000474136 SIGLEC14Q08ET2 396 aa23.15■■□□□ 1.3
APP-215ENST00000474136 XRRA1Q6P2D8 792 aa23.15■■□□□ 1.3
APP-215ENST00000474136 VN1R2Q8NFZ6 395 aa23.15■■□□□ 1.3
APP-215ENST00000474136 CUL5Q93034 780 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms