RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 DIS3L2Q8IYB7 885 aaKnown RBP21.45■■□□□ 1.02
PTCD3-210ENST00000473829 CCDC155Q8N6L0 562 aa21.45■■□□□ 1.02
PTCD3-210ENST00000473829 ETNPPLQ8TBG4 499 aa21.45■■□□□ 1.02
PTCD3-210ENST00000473829 AFAP1L1Q8TED9 768 aa21.45■■□□□ 1.02
PTCD3-210ENST00000473829 TMX3Q96JJ7 454 aa21.45■■□□□ 1.02
PTCD3-210ENST00000473829 AZI2Q9H6S1 392 aa21.45■■□□□ 1.02
PTCD3-210ENST00000473829 STAT5BP51692 787 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 PPFIA1Q13136 1202 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 TRIM29Q14134 588 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 GPNMBQ14956 572 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 PLCB4Q15147 1175 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 ZNF746Q6NUN9 644 aaPredicted RBP21.44■■□□□ 1.02
PTCD3-210ENST00000473829 PSRC1Q6PGN9 363 aaPredicted RBP21.44■■□□□ 1.02
PTCD3-210ENST00000473829 LRRC8DQ7L1W4 858 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 PLPPR4Q7Z2D5 763 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 DEFB128Q7Z7B8 93 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 RETREG2Q8NC44 543 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
PTCD3-210ENST00000473829 DDX25Q9UHL0 483 aaKnown RBP21.44■■□□□ 1.02
PTCD3-210ENST00000473829 SIP14410 1827 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 MYH9P35579 1960 aaKnown RBP21.43■■□□□ 1.02
PTCD3-210ENST00000473829 PSMD10O75832 226 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 SELPP16109 830 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 HMGN5P82970 282 aaKnown RBP21.43■■□□□ 1.02
PTCD3-210ENST00000473829 KRT76Q01546 638 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 GRIK4Q16099 956 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 MARCH8Q5T0T0 291 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 ZNF618Q5T7W0 954 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 RASIP1Q5U651 963 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 LRCH2Q5VUJ6 765 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 MIS18BP1Q6P0N0 1132 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 ZBTB10Q96DT7 871 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 RIT2Q99578 217 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 UNC45AQ9H3U1 944 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 NRCAMQ92823 1304 aa21.43■■□□□ 1.02
PTCD3-210ENST00000473829 WNT7AO00755 349 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 BACH1O14867 736 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 GAS7O60861 476 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 MBTPS1Q14703 1052 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 SWSAP1Q6NVH7 229 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 RUFY4Q6ZNE9 571 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 SMAP1Q8IYB5 467 aaPredicted RBP21.42■■□□□ 1.02
PTCD3-210ENST00000473829 C8orf76Q96K31 380 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 TEKT3Q9BXF9 490 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 ZNF302Q9NR11 478 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 CXXC1Q9P0U4 656 aaPredicted RBP21.42■■□□□ 1.02
PTCD3-210ENST00000473829 TRPC6Q9Y210 931 aa21.42■■□□□ 1.02
PTCD3-210ENST00000473829 CHMP2AO43633 222 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 CCNT1O60563 726 aaKnown RBP21.41■■□□□ 1.02
PTCD3-210ENST00000473829 NBNO60934 754 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 FGBP02675 491 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 GNAT1P11488 350 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 INSRRP14616 1297 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 ATP4AP20648 1035 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 RFC2P35250 354 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 IGBP1P78318 339 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 FAM109BQ6ICB4 259 aaPredicted RBP21.41■■□□□ 1.02
PTCD3-210ENST00000473829 PPP4R3AQ6IN85 833 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 B3GNT9Q6UX72 402 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 OTOP2Q7RTS6 562 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 TRAPPC12Q8WVT3 735 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 HERVK_113Q902F9 699 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 KCNMB3Q9NPA1 279 aa21.41■■□□□ 1.02
PTCD3-210ENST00000473829 IGSF9BQ9UPX0 1349 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 MBLAC1A4D2B0 266 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-210ENST00000473829 WDR64B1ANS9 1081 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 GCFC2P16383 781 aaKnown RBP21.4■■□□□ 1.02
PTCD3-210ENST00000473829 THPOP40225 353 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 TCTN1Q2MV58 587 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 FAM160B1Q5W0V3 765 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 PDXDC2PQ6P474 469 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 RPUSD2Q8IZ73 545 aaKnown RBP21.4■■□□□ 1.02
PTCD3-210ENST00000473829 FAM184AQ8NB25 1140 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 FBXO18Q8NFZ0 1043 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 TCEAL9Q9UHQ7 104 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 TUBE1Q9UJT0 475 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 PCDHA10Q9Y5I2 948 aa21.4■■□□□ 1.02
PTCD3-210ENST00000473829 MAFBQ9Y5Q3 323 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-210ENST00000473829 GBF1Q92538 1859 aa21.39■■□□□ 1.02
PTCD3-210ENST00000473829 POTEB3A0JP26 581 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 PSAPP07602 524 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 PFKMP08237 780 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 SLC26A2P50443 739 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 UGCGQ16739 394 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 POTEBQ6S5H4 581 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 HAS1Q92839 578 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 OSBPL7Q9BZF2 842 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 DISC1Q9NRI5 854 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 GABBR1Q9UBS5 961 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 SAMM50Q9Y512 469 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 PTPRSQ13332 1948 aa21.39■■□□□ 1.01
PTCD3-210ENST00000473829 CXCL10P02778 98 aa21.38■■□□□ 1.01
PTCD3-210ENST00000473829 CTSHP09668 335 aa21.38■■□□□ 1.01
PTCD3-210ENST00000473829 MCM2P49736 904 aa21.38■■□□□ 1.01
PTCD3-210ENST00000473829 ATP8B4Q8TF62 1192 aa21.38■■□□□ 1.01
PTCD3-210ENST00000473829 VAV3Q9UKW4 847 aa21.38■■□□□ 1.01
PTCD3-210ENST00000473829 CDH23Q9H251 3354 aa21.37■■□□□ 1.01
PTCD3-210ENST00000473829 GRXCR1A8MXD5 290 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms