RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ZSWIM4Q9H7M6 989 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 MYO1AQ9UBC5 1043 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 NXF1Q9UBU9 619 aaKnown RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 CDC23Q9UJX2 597 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 TMCO1Q9UM00 188 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 CILPO75339 1184 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 VIMP08670 466 aaKnown RBP5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 LMNB1P20700 586 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 CDC27P30260 824 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SCNN1BP51168 640 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF252P-AS1Q0IIN9 211 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 STIM1Q13586 685 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 IKBKEQ14164 716 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 MPP2Q14168 576 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 GRIK5Q16478 980 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 ALDH1L2Q3SY69 923 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SEZ6Q53EL9 994 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 RNF187Q5TA31 235 aaPredicted RBP5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 LLGL2Q6P1M3 1020 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC121Q6ZUS5 278 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 TMC6Q7Z403 805 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 TTC6Q86TZ1 520 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 TCP11L2Q8N4U5 519 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 GRIN3AQ8TCU5 1115 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 EMILIN2Q9BXX0 1053 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 HDAC6Q9UBN7 1215 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 MTMR6Q9Y217 621 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 RIPOR2Q9Y4F9 1068 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 DISP2A7MBM2 1401 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 ABCC5O15440 1437 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 TOPAZ1Q8N9V7 1692 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 USP32Q8NFA0 1604 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SH3TC1Q8TE82 1336 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 TMEM221A6NGB7 291 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 LRRC10BA6NIK2 292 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SOX1O00570 391 aaPredicted RBP5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 VDRP11473 427 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 VSNL1P62760 191 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 PIP4K2BP78356 416 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 MYO1EQ12965 1108 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SERINC3Q13530 473 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 CUL4BQ13620 913 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 GNPTABQ3T906 1256 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 GDF6Q6KF10 455 aaPredicted RBP5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 Q6ZNB5 142 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SEPT14Q6ZU15 432 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 PDZD3Q86UT5 571 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 DHX40Q8IX18 779 aaKnown RBP5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 NPAS3Q8IXF0 933 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 COG1Q8WTW3 980 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 SLC35B4Q969S0 331 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 GAL3ST3Q96A11 431 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 DHRS1Q96LJ7 313 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 BPIFA3Q9BQP9 254 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 NACA2Q9H009 215 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 NOP53Q9NZM5 478 aaKnown RBP5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 ATXN10Q9UBB4 475 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 PPP2R2CQ9Y2T4 447 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 STARD13Q9Y3M8 1113 aa5.68□□□□□ -1.5
TMEM39A-206ENST00000473684 LRRD1A4D1F6 860 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 STXBP3O00186 592 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 CYP27B1O15528 508 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 KRT38O76015 456 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ALDH3A1P30838 453 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 PSMC4P43686 418 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 CTCFP49711 727 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 PKN1Q16512 942 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 WHAMMP3Q1A5X7 153 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 SCARA3Q6AZY7 606 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 SYNE3Q6ZMZ3 975 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 SYCP3Q8IZU3 236 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ATP11CQ8NB49 1132 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ERMNQ8TAM6 284 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 KCNN1Q92952 543 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 SHDQ96IW2 340 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 WDR24Q96S15 920 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 NUP58Q9BVL2 599 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 SOX17Q9H6I2 414 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 SUGCTQ9HAC7 445 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 LUC7LQ9NQ29 371 aaKnown RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 WDR35Q9P2L0 1181 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 BRWD3Q6RI45 1802 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 GPR75-ASB3A0A0A6YYF3 556 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 H3BM21 787 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 H3BRJ5 948 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 HMMRO75330 724 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 RGS9O75916 674 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 DNAJC8O75937 253 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF202O95125 648 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ATP6V1G2O95670 118 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 PARP1P09874 1014 aaKnown RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC175P0C221 793 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 FAM200BP0CF97 657 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 GNAQP50148 359 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 INHBCP55103 352 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ACCSLQ4AC99 568 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 PABPC1LQ4VXU2 614 aaKnown RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 C6orf89Q6UWU4 347 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms