RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 RBAK-RBAKDNI3L0D1 243 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 SORBS3O60504 671 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 LGALS2P05162 132 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 SELPP16109 830 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 ERVK-21P61565 698 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 TCTN1Q2MV58 587 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 CEP55Q53EZ4 464 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 LRRC8DQ7L1W4 858 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 NIPA1Q7RTP0 329 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 GJD3Q8N144 294 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 DHX38Q92620 1227 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 GPR20Q99678 358 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 SLKQ9H2G2 1235 aaPredicted RBP14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 TUT1Q9H6E5 874 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 UBE2ZQ9H832 354 aaPredicted RBP14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 TMEM260Q9NX78 707 aa14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 ZNF215Q9UL58 517 aaPredicted RBP14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 KAT6AQ92794 2004 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 STK36Q9NRP7 1315 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 PFKFB2O60825 505 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 NBNO60934 754 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 GJB5O95377 273 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 CXCL10P02778 98 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 CYP3A4P08684 503 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 KCNA5P22460 613 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 AK2P54819 239 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 ARHGAP4P98171 946 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 RBL2Q08999 1139 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 STK3Q13188 491 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 JAKMIP3Q5VZ66 844 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 FAM117BQ6P1L5 589 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 ALYREFQ86V81 257 aaKnown RBP14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 FAM178BQ8IXR5 827 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 CRYGNQ8WXF5 182 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 PGBD1Q96JS3 809 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 ALG1Q9BT22 464 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 KCNH7Q9NS40 1196 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 HDAC6Q9UBN7 1215 aa14.76□□□□□ -0.05
SHROOM3-204ENST00000473602 NFASCO94856 1347 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 ABHD14A-ACY1A0A1B0GW23 586 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 LINC01553A4QN01 128 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 MEIS1O00470 390 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 ATP9AO75110 1047 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 PARNO95453 639 aaKnown RBP14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 SEC24BO95487 1268 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 CKBP12277 381 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 ZNF76P36508 570 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 SCRN1Q12765 414 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 LEXMQ3ZCV2 418 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 GALNT17Q6IS24 598 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 SDF4Q9BRK5 362 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 BCAS3Q9H6U6 928 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 VPS54Q9P1Q0 977 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
SHROOM3-204ENST00000473602 PRR33A8MZF0 331 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 PPFIA3O75145 1194 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 HOXC8P31273 242 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 SSTR3P32745 418 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 TCF7P36402 384 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 NLRP5P59047 1200 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 SETQ01105 290 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 PTK7Q13308 1070 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 IKBKEQ14164 716 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 C8orf34Q49A92 452 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 SEPT1Q8WYJ6 367 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 UIMC1Q96RL1 719 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 JPH1Q9HDC5 661 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 SLC9A2Q9UBY0 812 aa14.74□□□□□ -0.05
SHROOM3-204ENST00000473602 EMSYQ7Z589 1322 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 IL9P15248 144 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 NEK4P51957 841 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 SP4Q02446 784 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 PTCRAQ6ISU1 281 aaPredicted RBP14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 DAGLBQ8NCG7 672 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 CYP2W1Q8TAV3 490 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 AGO4Q9HCK5 861 aaKnown RBP14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 PCDHA4Q9UN74 947 aa14.73□□□□□ -0.05
SHROOM3-204ENST00000473602 IGLV3-22A0A075B6J6 115 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 GSTTP1A0A1W2PQM5 241 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 C17orf102A2RUQ5 167 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 FAM86B1E9PN63 330 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 EFCAB14O75071 495 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 FAM86B2P0C5J1 330 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 SMIM10L2AP0DMW4 78 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 SMIM10L2BP0DMW5 78 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 ARP10275 920 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 GNAT1P11488 350 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 XBP1P17861 261 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 CIITAP33076 1130 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 PLA2G4DQ86XP0 818 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 TRIM50Q86XT4 487 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 WASF1Q92558 559 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 C17orf80Q9BSJ5 609 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 SMARCAD1Q9H4L7 1026 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms