RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 RFPL1O75677 317 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 JMJD7P0C870 316 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 U2AF1L5P0DN76 240 aaPredicted RBP6.34□□□□□ -1.39
CCDC66-215ENST00000473322 HOXA5P20719 270 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 U2AF1Q01081 240 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCDC66-215ENST00000473322 STRN3Q13033 797 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 ZNF460Q14592 562 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 PCBP1Q15365 356 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCDC66-215ENST00000473322 CFAP100Q494V2 611 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 LILRA6Q6PI73 481 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.39
CCDC66-215ENST00000473322 LINC00482Q8N8I6 264 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 SMARCC2Q8TAQ2 1214 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCDC66-215ENST00000473322 USP7Q93009 1102 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 TCF7L1Q9HCS4 588 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 FBXL7Q9UJT9 491 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 ZNF652Q9Y2D9 606 aa6.34□□□□□ -1.39
CCDC66-215ENST00000473322 HGSO14964 777 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 AKAP10O43572 662 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 KATNA1O75449 491 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 DGKIO75912 1065 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 SCGB1D2O95969 90 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 CYP2C8P10632 490 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 SCNN1BP51168 640 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 DLX2Q07687 328 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 FAM50AQ14320 339 aaKnown RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 VMACQ2NL98 169 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 EMC4Q5J8M3 183 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 CDCA2Q69YH5 1023 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 MILR1Q7Z6M3 343 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 ZC3H18Q86VM9 953 aaKnown RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 PASD1Q8IV76 773 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 RAVER1Q8IY67 606 aaKnown RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 TCEAL8Q8IYN2 117 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 XYLT2Q9H1B5 865 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 NGRNQ9NPE2 291 aaKnown RBP6.33□□□□□ -1.4
CCDC66-215ENST00000473322 CLDND1Q9NY35 253 aa6.33□□□□□ -1.4
CCDC66-215ENST00000473322 SHTN1A0MZ66 631 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 CBX4O00257 560 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 PLIN1O60240 522 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 F2P00734 622 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 C8BP07358 591 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 RAB27AP51159 221 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 GPR85P60893 370 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 OCRLQ01968 901 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 UBE4AQ14139 1066 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 LIPIQ6XZB0 460 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 FAM126BQ8IXS8 530 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCDC66-215ENST00000473322 TSR2Q969E8 191 aaKnown RBP6.32□□□□□ -1.4
CCDC66-215ENST00000473322 WNK4Q96J92 1243 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 CHAMP1Q96JM3 812 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 PHF20Q9BVI0 1012 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 CELF4Q9BZC1 486 aaKnown RBP6.32□□□□□ -1.4
CCDC66-215ENST00000473322 SLC13A1Q9BZW2 595 aa6.32□□□□□ -1.4
CCDC66-215ENST00000473322 GOLGA6CA6NDK9 693 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 GOLGA6BA6NDN3 693 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 KPNA6O60684 536 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 TADA3O75528 432 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 ABLIM3O94929 683 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 FBXO21O94952 628 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 CRTAMO95727 393 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 GOLGA6DP0CG33 693 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 KCNA6P17658 529 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 SLURP1P55000 103 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 CTSWP56202 376 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 DSG1Q02413 1049 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 FAM102BQ5T8I3 360 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 STEAP3Q658P3 488 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 USP53Q70EK8 1073 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 EXOC8Q8IYI6 725 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 CHPFQ8IZ52 775 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 IFNL3Q8IZI9 196 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 PHOSPHO1Q8TCT1 267 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 C20orf173Q96LM9 149 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCDC66-215ENST00000473322 GOLGA6AQ9NYA3 693 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 RTEL1Q9NZ71 1219 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
CCDC66-215ENST00000473322 NEMP1O14524 444 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 GABRDO14764 452 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 MAFKO60675 156 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 PEX14O75381 377 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 ULK1O75385 1050 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 LSSP48449 732 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 ITKQ08881 620 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
CCDC66-215ENST00000473322 CXorf57Q6NSI4 855 aaKnown RBP6.3□□□□□ -1.4
CCDC66-215ENST00000473322 LBX2Q6XYB7 198 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 FRMD5Q7Z6J6 570 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 SAMD3Q8N6K7 520 aa6.3□□□□□ -1.4
CCDC66-215ENST00000473322 CNTD1Q8N815 330 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms