RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 UBR2Q8IWV8 1755 aa8.75□□□□□ -1.01
SCAF4-205ENST00000472318 hCG_2014768A0A024R1R8 64 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 SHISA3A0PJX4 238 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 RGS13O14921 159 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 TLR3O15455 904 aaKnown RBP8.74□□□□□ -1.01
SCAF4-205ENST00000472318 KCNQ3O43525 872 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 ATE1O95260 518 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 ATP2B1P20020 1258 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 EIF4A3P38919 411 aaKnown RBP8.74□□□□□ -1.01
SCAF4-205ENST00000472318 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 HDLBPQ00341 1268 aaKnown RBP8.74□□□□□ -1.01
SCAF4-205ENST00000472318 MTHFSDQ2M296 383 aaKnown RBP8.74□□□□□ -1.01
SCAF4-205ENST00000472318 SDE2Q6IQ49 451 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 DPP8Q6V1X1 898 aaPredicted RBP8.74□□□□□ -1.01
SCAF4-205ENST00000472318 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
SCAF4-205ENST00000472318 SHISA4Q96DD7 197 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 DIRC2Q96SL1 478 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 MTMR10Q9NXD2 777 aa8.74□□□□□ -1.01
SCAF4-205ENST00000472318 KRT1P04264 644 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 CRKP46108 304 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 PTPROQ16827 1216 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 LCE1DQ5T752 114 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 EGFLAMQ63HQ2 1017 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 ERO1AQ96HE7 468 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 BRMS1Q9HCU9 246 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 GMIPQ9P107 970 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 PCDHB14Q9Y5E9 798 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 PTCH2Q9Y6C5 1203 aa8.73□□□□□ -1.01
SCAF4-205ENST00000472318 SLC22A31A6NKX4 558 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 UBOX5O94941 541 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 IL13P35225 146 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 PLA2G5P39877 138 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 CCDC144BQ3MJ40 725 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 SLC9C1Q4G0N8 1177 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 UBE2Q1Q7Z7E8 422 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 LILRA2Q8N149 483 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 RNF32Q9H0A6 362 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 EPB41L4BQ9H329 900 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 DBNDD1Q9H9R9 158 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 STAP2Q9UGK3 403 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 ABCC4O15439 1325 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 RTL9Q8NET4 1388 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 TTC28Q96AY4 2481 aa8.72□□□□□ -1.01
SCAF4-205ENST00000472318 LAMA2P24043 3122 aaKnown RBP8.71□□□□□ -1.01
SCAF4-205ENST00000472318 FITM1A5D6W6 292 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 RPS12P25398 132 aaKnown RBP8.71□□□□□ -1.02
SCAF4-205ENST00000472318 GBP1P32455 592 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 TRHRP34981 398 aaPredicted RBP8.71□□□□□ -1.02
SCAF4-205ENST00000472318 TEKQ02763 1124 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 NR0B2Q15466 257 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 KRTAP19-4Q3LI73 84 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 ARSHQ5FYA8 562 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 SUSD4Q5VX71 490 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 HS2ST1Q7LGA3 356 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 SP8Q8IXZ3 490 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 OXR1Q8N573 874 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 SLC43A3Q8NBI5 491 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 IL17REQ8NFR9 667 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 SH3TC2Q8TF17 1288 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 DHX38Q92620 1227 aaKnown RBP8.71□□□□□ -1.02
SCAF4-205ENST00000472318 NYXQ9GZU5 481 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 TMX4Q9H1E5 349 aaPredicted RBP8.71□□□□□ -1.02
SCAF4-205ENST00000472318 ADAMTS1Q9UHI8 967 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 ZNF281Q9Y2X9 895 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 UBN2Q6ZU65 1347 aa8.71□□□□□ -1.02
SCAF4-205ENST00000472318 RAG1P15918 1043 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
SCAF4-205ENST00000472318 RNF4P78317 190 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 CRHR2Q13324 411 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 TIGD5Q53EQ6 642 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 OVOS1Q6IE37 1185 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 ENOX1Q8TC92 643 aaKnown RBP8.7□□□□□ -1.02
SCAF4-205ENST00000472318 GPATCH3Q96I76 525 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 TOX2Q96NM4 488 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 HDAC8Q9BY41 377 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 EHMT1Q9H9B1 1298 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 DCP1AQ9NPI6 582 aaPredicted RBP8.7□□□□□ -1.02
SCAF4-205ENST00000472318 GGT7Q9UJ14 662 aa8.7□□□□□ -1.02
SCAF4-205ENST00000472318 NTSR2O95665 410 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 HMOX1P09601 288 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 GPTP24298 496 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 ANAPC15P60006 121 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 SP3Q02447 781 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 NMIQ13287 307 aaPredicted RBP8.69□□□□□ -1.02
SCAF4-205ENST00000472318 CDCP2Q5VXM1 449 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 C1QL4Q86Z23 238 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 SYTL5Q8TDW5 730 aaPredicted RBP8.69□□□□□ -1.02
SCAF4-205ENST00000472318 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.69□□□□□ -1.02
SCAF4-205ENST00000472318 MAGEC2Q9UBF1 373 aaPredicted RBP8.69□□□□□ -1.02
SCAF4-205ENST00000472318 NR2E3Q9Y5X4 410 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 POLR2AP24928 1970 aaKnown RBP8.69□□□□□ -1.02
SCAF4-205ENST00000472318 DUOX1Q9NRD9 1551 aa8.69□□□□□ -1.02
SCAF4-205ENST00000472318 MED14OSP0DP75 135 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
SCAF4-205ENST00000472318 TEFQ10587 303 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 DUSP4Q13115 394 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 PRKG1Q13976 671 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 CLEC16AQ2KHT3 1053 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 MORC4Q8TE76 937 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 FAM122AQ96E09 287 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms