RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	SAPCD2	Q86UD0	394 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	KCTD17	Q8N5Z5	321 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	KIAA0895	Q8NCT3	520 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	MPHOSPH6	Q99547	160 aa	Known RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	RUSC1	Q9BVN2	902 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	XPO4	Q9C0E2	1151 aa	Known RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	ZSWIM4	Q9H7M6	989 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	POLD4	Q9HCU8	107 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	PLXNB2	O15031	1838 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	PASK	Q96RG2	1323 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	ARHGEF35	A5YM69	484 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	TRIM49B	A6NDI0	452 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	MANSC4	A6NHS7	340 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	ECM2	O94769	699 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	EDNRB	P24530	442 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	QARS	P47897	775 aa	Known RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	PSMD2	Q13200	908 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	GIT2	Q14161	759 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	UGCG	Q16739	394 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	RINT1	Q6NUQ1	792 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	FGD4	Q96M96	766 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	REEP2	Q9BRK0	252 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	JPH1	Q9HDC5	661 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	MORF4L1	Q9UBU8	362 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	SLC9A2	Q9UBY0	812 aa		11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	ABT1	Q9ULW3	272 aa	Known RBP	11.97	□□□□□ -0.49
MRPS18B-208	ENST00000472267	NFASC	O94856	1347 aa		11.96	□□□□□ -0.49
MRPS18B-208	ENST00000472267	MCM3AP	O60318	1980 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	LOXHD1	Q8IVV2	1947 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	DNAJC25-GNG10	A0A024R161	153 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	TBCA	O75347	108 aa	Known RBP	11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	ZNF18	P17022	549 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	ICAM3	P32942	547 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PMS1	P54277	932 aa	Known RBP	11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	UBASH3A	P57075	661 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SP2	Q02086	613 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	FAM26F	Q5R3K3	315 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CYFIP1	Q7L576	1253 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CREBRF	Q8IUR6	639 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	GLIS3	Q8NEA6	775 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	P2RX5	Q93086	422 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	MRFAP1L1	Q96HT8	127 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	TRIM47	Q96LD4	638 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CCDC43	Q96MW1	224 aa	Known RBP	11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SENP7	Q9BQF6	1050 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CPA4	Q9UI42	421 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	TELO2	Q9Y4R8	837 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PCDHA10	Q9Y5I2	948 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	IVNS1ABP	Q9Y6Y0	642 aa		11.96	□□□□□ -0.5
MRPS18B-208	ENST00000472267	WDR81	Q562E7	1941 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	LRRC37A2	A6NM11	1700 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PLXNA1	Q9UIW2	1896 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	GOLGA6L6	A8MZA4	724 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	RSPH10B2	B2RC85	870 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CBFA2T2	O43439	604 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	FAM13A	O94988	1023 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PSAP	P07602	524 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	RSPH10B	P0C881	870 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CCNE1	P24864	410 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	ADORA2A	P29274	412 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CDC25B	P30305	580 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PPP1R2	P41236	205 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	ACTR2	P61160	394 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PSMC5	P62195	406 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	EHHADH	Q08426	723 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	GRM1	Q13255	1194 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SMC1B	Q8NDV3	1235 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	RDM1	Q8NG50	284 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	FGFBP2	Q9BYJ0	223 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	RTN4	Q9NQC3	1192 aa	Known RBP	11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	GABBR1	Q9UBS5	961 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	TLL2	Q9Y6L7	1015 aa		11.95	□□□□□ -0.5
MRPS18B-208	ENST00000472267	BICDL2	A1A5D9	508 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	TMEM150B	A6NC51	233 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SFI1	A8K8P3	1242 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	KIF3C	O14782	793 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	BACH1	O14867	736 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SLC10A3	P09131	477 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	UBA1	P22314	1058 aa	Known RBP	11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	TAF1C	Q15572	869 aa	Predicted RBP	11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	CDKAL1	Q5VV42	579 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	ANKRD40	Q6AI12	368 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SWSAP1	Q6NVH7	229 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	MIS18BP1	Q6P0N0	1132 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	C1orf186	Q6ZWK4	172 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SFR1	Q86XK3	245 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	FBXO16	Q8IX29	292 aa	Predicted RBP	11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	MYOCD	Q8IZQ8	938 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	SH2D3A	Q9BRG2	576 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	NRBP1	Q9UHY1	535 aa		11.94	□□□□□ -0.5
MRPS18B-208	ENST00000472267	FRMD3	A2A2Y4	597 aa		11.93	□□□□□ -0.5
MRPS18B-208	ENST00000472267	LYPLA2	O95372	231 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms