RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
CLRN1-205ENST00000472224 WDR81Q562E7 1941 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 TANC1Q9C0D5 1861 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 DDX39AO00148 427 aaKnown RBP13.49□□□□□ -0.25
CLRN1-205ENST00000472224 MAP3K13O43283 966 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 F2P00734 622 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 LGALS2P05162 132 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 ARP10275 920 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 TRIM29Q14134 588 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 PRR16Q569H4 304 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 SLC43A3Q8NBI5 491 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
CLRN1-205ENST00000472224 KAT2BQ92831 832 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
CLRN1-205ENST00000472224 GPR20Q99678 358 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 SENP7Q9BQF6 1050 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 JPH1Q9HDC5 661 aaPredicted RBP13.49□□□□□ -0.25
CLRN1-205ENST00000472224 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 IL23AQ9NPF7 189 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
CLRN1-205ENST00000472224 KCNH7Q9NS40 1196 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 SCN5AQ14524 2016 aa13.49□□□□□ -0.25
CLRN1-205ENST00000472224 CCDC194A0A1B0GVG4 234 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 RFXAPO00287 272 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 FAM86B2P0C5J1 330 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 CYP2C9P11712 490 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 CYP2C18P33260 490 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 MRE11P49959 708 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
CLRN1-205ENST00000472224 KIAA0753Q2KHM9 967 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 PPP2R2DQ66LE6 453 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 KRT40Q6A162 431 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 GALNT17Q6IS24 598 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 NFRKBQ6P4R8 1299 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 C7orf31Q8N865 590 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 PHF20Q9BVI0 1012 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 SEZ6LQ9BYH1 1024 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 BACH2Q9BYV9 841 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 HIPK3Q9H422 1215 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 AGO4Q9HCK5 861 aaKnown RBP13.48□□□□□ -0.25
CLRN1-205ENST00000472224 BRMS1Q9HCU9 246 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 TCEAL9Q9UHQ7 104 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
CLRN1-205ENST00000472224 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 MEIS1O00470 390 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 PPFIA4O75335 1185 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 CD4P01730 458 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 CYP3A4P08684 503 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 HOXD8P13378 290 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 FDPSP14324 419 aaKnown RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 POU3F3P20264 500 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 MARK3P27448 753 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 KRT2P35908 639 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 TCF7P36402 384 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 SETQ01105 290 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 GUCY1B3Q02153 619 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 NPY5RQ15761 445 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 INF2Q27J81 1249 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 NIPA1Q7RTP0 329 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 ZNF577Q9BSK1 485 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 SLC9A2Q9UBY0 812 aa13.47□□□□□ -0.25
CLRN1-205ENST00000472224 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-205ENST00000472224 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 H3BRB1 525 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 M0R2N6 131 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 MAFGO15525 162 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
CLRN1-205ENST00000472224 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-205ENST00000472224 PTGISQ16647 500 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-205ENST00000472224 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 OTOP2Q7RTS6 562 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 FAM184AQ8NB25 1140 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 SEPT1Q8WYJ6 367 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 GLG1Q92896 1179 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.25
CLRN1-205ENST00000472224 TUT1Q9H6E5 874 aaKnown RBP13.46□□□□□ -0.25
CLRN1-205ENST00000472224 USP34Q70CQ2 3546 aa13.46□□□□□ -0.26
CLRN1-205ENST00000472224 NFASCO94856 1347 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 HAS3O00219 553 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
CLRN1-205ENST00000472224 TDP2O95551 362 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 FGBP02675 491 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 CCL23P55773 120 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms