RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CCDC43Q96MW1 224 aaKnown RBP18.9■□□□□ 0.62
CCM2-205ENST00000472223 POLR3CQ9BUI4 534 aaPredicted RBP18.9■□□□□ 0.62
CCM2-205ENST00000472223 KATNAL1Q9BW62 490 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 ZSWIM4Q9H7M6 989 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 GABBR1Q9UBS5 961 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 A0A1W2PQ27 194 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 A0A1W2PQ64 194 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 A0A1W2PQD8 194 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 EML1O00423 815 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 GJB1P08034 283 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 PTMSP20962 102 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 CMA1P23946 247 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 RPA1P27694 616 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 BEX3Q00994 111 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 LHX8Q68G74 356 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 PLPPR4Q7Z2D5 763 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 KCTD17Q8N5Z5 321 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 TMEM87AQ8NBN3 555 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 SYMPKQ92797 1274 aaKnown RBP18.89■□□□□ 0.61
CCM2-205ENST00000472223 VTI1AQ96AJ9 217 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 TSEN34Q9BSV6 310 aaKnown RBP18.89■□□□□ 0.61
CCM2-205ENST00000472223 CCSER1Q9C0I3 900 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 NRBP2Q9NSY0 501 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 ERAP1Q9NZ08 941 aa18.89■□□□□ 0.61
CCM2-205ENST00000472223 MYH9P35579 1960 aaKnown RBP18.89■□□□□ 0.61
CCM2-205ENST00000472223 SGPL1O95470 568 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 CST5P28325 142 aaPredicted RBP18.88■□□□□ 0.61
CCM2-205ENST00000472223 UBE2HP62256 183 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 NKX3-2P78367 333 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 CYP4A11Q02928 519 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 GRIN1Q05586 938 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 SPECC1Q5M775 1068 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 CCDC73Q6ZRK6 1079 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 OTUD6AQ7L8S5 288 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 BANK1Q8NDB2 785 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 MRPS27Q92552 414 aaKnown RBP18.88■□□□□ 0.61
CCM2-205ENST00000472223 CCDC34Q96HJ3 373 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 FAM167AQ96KS9 214 aa18.88■□□□□ 0.61
CCM2-205ENST00000472223 MTG1Q9BT17 334 aaPredicted RBP18.88■□□□□ 0.61
CCM2-205ENST00000472223 MOXD2PA6NHM9 499 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 ADAMTS4O75173 837 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 LGR5O75473 907 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 CABYRO75952 493 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 LGALS2P05162 132 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 CDC25AP30304 524 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 CHMP4BP1P59074 171 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
CCM2-205ENST00000472223 LRRC41Q15345 812 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 KCNA10Q16322 511 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 AXDND1Q5T1B0 1012 aaPredicted RBP18.87■□□□□ 0.61
CCM2-205ENST00000472223 RRAGBQ5VZM2 374 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 EMSYQ7Z589 1322 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 EPSTI1Q96J88 318 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 HSD17B14Q9BPX1 270 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 LXNQ9BS40 222 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
CCM2-205ENST00000472223 IGKV6D-21A0A0A0MT36 114 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 DDX11L8A8MPP1 907 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 PP2D1A8MPX8 630 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 H3BRB1 525 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 SLITRK3O94933 977 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 PTGS1P23219 599 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 RESP18Q5W5W9 173 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 SHC4Q6S5L8 630 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 CATSPER3Q86XQ3 398 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 CCDC60Q8IWA6 550 aaPredicted RBP18.86■□□□□ 0.61
CCM2-205ENST00000472223 FSIP1Q8NA03 581 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 U2AF1L4Q8WU68 220 aaKnown RBP18.86■□□□□ 0.61
CCM2-205ENST00000472223 GLT1D1Q96MS3 346 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 TUT1Q9H6E5 874 aaKnown RBP18.86■□□□□ 0.61
CCM2-205ENST00000472223 RGL1Q9NZL6 768 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 KIAA1024Q9UPX6 916 aa18.86■□□□□ 0.61
CCM2-205ENST00000472223 MAFBQ9Y5Q3 323 aaPredicted RBP18.86■□□□□ 0.61
CCM2-205ENST00000472223 DNM1LO00429 736 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 ASGR1P07306 291 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 ZNF286BP0CG31 522 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCM2-205ENST00000472223 HOXD8P13378 290 aaPredicted RBP18.85■□□□□ 0.61
CCM2-205ENST00000472223 STAT6P42226 847 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 GJA8P48165 433 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 C4orf19Q8IY42 314 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 IQUBQ8NA54 791 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 DDX19AQ9NUU7 478 aaKnown RBP18.85■□□□□ 0.61
CCM2-205ENST00000472223 OGDHLQ9ULD0 1010 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 KCNH3Q9ULD8 1083 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 TRPC6Q9Y210 931 aa18.85■□□□□ 0.61
CCM2-205ENST00000472223 A0A1B0GVL5 298 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 MED24O75448 989 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 MARK3P27448 753 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 SYKP43405 635 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 ACLYP53396 1101 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 PURAQ00577 322 aaKnown RBP18.84■□□□□ 0.61
CCM2-205ENST00000472223 KARSQ15046 597 aaKnown RBP18.84■□□□□ 0.61
CCM2-205ENST00000472223 TRMT1LQ7Z2T5 733 aaKnown RBP18.84■□□□□ 0.61
CCM2-205ENST00000472223 CEP57L1Q8IYX8 460 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms