RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
SPC25-203ENST00000472216 LTB4R2Q9NPC1 389 aa11.8□□□□□ -0.52
SPC25-203ENST00000472216 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
SPC25-203ENST00000472216 PUF60Q9UHX1 559 aaKnown RBP11.8□□□□□ -0.52
SPC25-203ENST00000472216 TMX2Q9Y320 296 aa11.8□□□□□ -0.52
SPC25-203ENST00000472216 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
SPC25-203ENST00000472216 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
SPC25-203ENST00000472216 DNHD1Q96M86 4753 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPC25-203ENST00000472216 SLC28A2O43868 658 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 SRSF5Q13243 272 aaKnown RBP11.79□□□□□ -0.52
SPC25-203ENST00000472216 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
SPC25-203ENST00000472216 DEFB124Q8NES8 71 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 VPS45Q9NRW7 570 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPC25-203ENST00000472216 CTDP1Q9Y5B0 961 aaPredicted RBP11.79□□□□□ -0.52
SPC25-203ENST00000472216 ATMQ13315 3056 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 SDK1Q7Z5N4 2213 aa11.79□□□□□ -0.52
SPC25-203ENST00000472216 PLXNA4Q9HCM2 1894 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 GRM8O00222 908 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 ADCY1Q08828 1119 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 APOBRQ0VD83 1088 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 RASGRF1Q13972 1273 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 MLF2Q15773 248 aaPredicted RBP11.78□□□□□ -0.52
SPC25-203ENST00000472216 LETM2Q2VYF4 491 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 PAN2Q504Q3 1202 aaKnown RBP11.78□□□□□ -0.52
SPC25-203ENST00000472216 TMC5Q6UXY8 1006 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 SCUBE3Q8IX30 993 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 LIN37Q96GY3 246 aaPredicted RBP11.78□□□□□ -0.52
SPC25-203ENST00000472216 SLC32A1Q9H598 525 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
SPC25-203ENST00000472216 EPN2O95208 641 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 GBP2P32456 591 aaPredicted RBP11.77□□□□□ -0.53
SPC25-203ENST00000472216 PDE4BQ07343 736 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 SPOUT1Q5T280 376 aaKnown RBP11.77□□□□□ -0.53
SPC25-203ENST00000472216 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
SPC25-203ENST00000472216 SMOC1Q9H4F8 434 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 PRORYQ9H606 182 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 EPS15L1Q9UBC2 864 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 LZTS1Q9Y250 596 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 PCDHGA5Q9Y5G8 931 aa11.77□□□□□ -0.53
SPC25-203ENST00000472216 PARP14Q460N5 1801 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 ENPP3O14638 875 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 ZBED4O75132 1171 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 SHMT1P34896 483 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 CCR3P51677 355 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 SIM1P81133 766 aaPredicted RBP11.76□□□□□ -0.53
SPC25-203ENST00000472216 SLC44A4Q53GD3 710 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 GPR149Q86SP6 731 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 PIP4K2CQ8TBX8 421 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 KAT2BQ92831 832 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 ARID3AQ99856 593 aa11.76□□□□□ -0.53
SPC25-203ENST00000472216 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
SPC25-203ENST00000472216 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
SPC25-203ENST00000472216 RBM47A0AV96 593 aaKnown RBP11.75□□□□□ -0.53
SPC25-203ENST00000472216 CD72P21854 359 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 PPP4CP60510 307 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 G2E3Q7L622 706 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 TMC7Q7Z402 723 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 SERINC5Q86VE9 423 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 LONP2Q86WA8 852 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 DHX37Q8IY37 1157 aaKnown RBP11.75□□□□□ -0.53
SPC25-203ENST00000472216 SLF1Q9BQI6 1058 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 OSBPL7Q9BZF2 842 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
SPC25-203ENST00000472216 CHURC1-FNTBB4DL54 471 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 MPLP40238 635 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 FNTBP49356 437 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 GPC5P78333 572 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 FKBP5Q13451 457 aaPredicted RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 TCEAL6Q6IPX3 200 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 TMEM179Q6ZVK1 233 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 MORC4Q8TE76 937 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 STAMQ92783 540 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 TCEAL3Q969E4 200 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 KATNAL1Q9BW62 490 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 ACAD9Q9H845 621 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 RAVER2Q9HCJ3 691 aaKnown RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 A1CFQ9NQ94 594 aaKnown RBP11.74□□□□□ -0.53
SPC25-203ENST00000472216 HOMER2Q9NSB8 354 aa11.74□□□□□ -0.53
SPC25-203ENST00000472216 TEX51A0A1B0GUA7 166 aa11.73□□□□□ -0.53
SPC25-203ENST00000472216 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
SPC25-203ENST00000472216 TARSP26639 723 aaKnown RBP11.73□□□□□ -0.53
SPC25-203ENST00000472216 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms