RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 LGR5O75473 907 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 BAG4O95429 457 aaKnown RBP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 MARK3P27448 753 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 SFNP31947 248 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 AK2P54819 239 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 IGBP1P78318 339 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 ZNF200P98182 395 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 NONOQ15233 471 aaKnown RBP eCLIP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 GRIK4Q16099 956 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 ZNF618Q5T7W0 954 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 RASIP1Q5U651 963 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 PPP2R2DQ66LE6 453 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 ZNF746Q6NUN9 644 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 NME8Q8N427 588 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 CYP2W1Q8TAV3 490 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 ZSCAN31Q96LW9 406 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 TEKT3Q9BXF9 490 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 ORC3Q9UBD5 711 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 TUBE1Q9UJT0 475 aa9.48□□□□□ -0.89
TSPAN1-205ENST00000472170 DOCK5Q9H7D0 1870 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 MYH9P35579 1960 aaKnown RBP9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 GRXCR1A8MXD5 290 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 WDR64B1ANS9 1081 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 FAM86B1E9PN63 330 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 TLL1O43897 1013 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 DKC1O60832 514 aaKnown RBP eCLIP9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 GAS7O60861 476 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 FAM86B2P0C5J1 330 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 INSRRP14616 1297 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 FOSL2P15408 326 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 TMOD1P28289 359 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 CIITAP33076 1130 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 JAK3P52333 1124 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 SCRN1Q12765 414 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 ZNF484Q5JVG2 852 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 SWSAP1Q6NVH7 229 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 TRIM50Q86XT4 487 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 USP38Q8NB14 1042 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 TBCKQ8TEA7 893 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 LMBR1Q8WVP7 490 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 FAM167AQ96KS9 214 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 RIT2Q99578 217 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 PBX4Q9BYU1 374 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 BCAS3Q9H6U6 928 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 TPCN1Q9ULQ1 816 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 LIMCH1Q9UPQ0 1083 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 STK36Q9NRP7 1315 aa9.47□□□□□ -0.89
TSPAN1-205ENST00000472170 MAGEB2O15479 319 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 GTPBP6O43824 516 aaPredicted RBP9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 ST18O60284 1047 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 ATG7O95352 703 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 CXCL10P02778 98 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 CTSHP09668 335 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 GCFC2P16383 781 aaKnown RBP9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 GNL2Q13823 731 aaKnown RBP9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 LRCH2Q5VUJ6 765 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 HERC6Q8IVU3 1022 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 EXOC8Q8IYI6 725 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 DAGLBQ8NCG7 672 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 RDM1Q8NG50 284 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 BBXQ8WY36 941 aaPredicted RBP9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 KIF3AQ9Y496 699 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 INSL6Q9Y581 213 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 PCDHA2Q9Y5H9 948 aa9.46□□□□□ -0.9
TSPAN1-205ENST00000472170 SCN5AQ14524 2016 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 NBNO60934 754 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 IGFBP4P22692 258 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 KRT2P35908 639 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 DNM2P50570 870 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 CDC42EP1Q00587 391 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 PLCB4Q15147 1175 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 LETM2Q2VYF4 491 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 Q4G0T1 1027 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 MOXD1Q6UVY6 613 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 ABHD15Q6UXT9 468 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 MIER3Q7Z3K6 550 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 NEK8Q86SG6 692 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 RPAINQ86UA6 219 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 FAM184AQ8NB25 1140 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 DBF4BQ8NFT6 615 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 ATP8B4Q8TF62 1192 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 DNAJB3Q8WWF6 145 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 DHX38Q92620 1227 aaKnown RBP9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 FAM20AQ96MK3 541 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 RAD9AQ99638 391 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 FTHL17Q9BXU8 183 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 IFIH1Q9BYX4 1025 aaKnown RBP9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 FAM49AQ9H0Q0 323 aaPredicted RBP9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 DISC1Q9NRI5 854 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 DDX25Q9UHL0 483 aaKnown RBP9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 SQORQ9Y6N5 450 aa9.45□□□□□ -0.9
TSPAN1-205ENST00000472170 COL1A2P08123 1366 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms