RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 EHD2Q9NZN4 543 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 COL20A1Q9P218 1284 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 ABCB11O95342 1321 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 FGFR1OPO95684 399 aaKnown RBP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 NMT1P30419 496 aaKnown RBP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 LDHDQ86WU2 507 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 IL31RAQ8NI17 732 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 HSD17B14Q9BPX1 270 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 RANBP17Q9H2T7 1088 aaKnown RBP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 DEF6Q9H4E7 631 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 NCK2O43639 380 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 AKR1B10O60218 316 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 PSMD10O75832 226 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 AKAP3O75969 853 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 CYP3A4P08684 503 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 SLC9A1P19634 815 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 CDK17Q00537 523 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 KCNH2Q12809 1159 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 COG2Q14746 738 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 LONRF2Q1L5Z9 754 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 ASTE1Q2TB18 679 aaPredicted RBP16.58■□□□□ 0.25
UBXN11-213ENST00000472155 LRCH2Q5VUJ6 765 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 RINT1Q6NUQ1 792 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 EPM2AIP1Q7L775 607 aaPredicted RBP16.58■□□□□ 0.25
UBXN11-213ENST00000472155 PSMD1Q99460 953 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 FZD1Q9UP38 647 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 RABGAP1Q9Y3P9 1069 aa16.58■□□□□ 0.25
UBXN11-213ENST00000472155 COL2A1P02458 1487 aaPredicted RBP16.58■□□□□ 0.24
UBXN11-213ENST00000472155 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.24
UBXN11-213ENST00000472155 ZMYND10O75800 440 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 POLR2MP0CAP2 368 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 CXCR5P32302 372 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 RASSF7Q02833 373 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 DMTNQ08495 405 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 WHAMMP3Q1A5X7 153 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 TDRD12Q587J7 1177 aaKnown RBP16.58■□□□□ 0.24
UBXN11-213ENST00000472155 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 ERMNQ8TAM6 284 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 SH2D3AQ9BRG2 576 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 ABCB6Q9NP58 842 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 HDAC9Q9UKV0 1011 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 SAR1BQ9Y6B6 198 aa16.58■□□□□ 0.24
UBXN11-213ENST00000472155 ASTN1O14525 1302 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 NFIBO00712 420 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 BUB1O43683 1085 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 IPO7O95373 1038 aaKnown RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 KIF5AQ12840 1032 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 SPA17Q15506 151 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 PAPD7Q5XG87 772 aaKnown RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 ZNF341Q9BYN7 854 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 ARFGAP3Q9NP61 516 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 AJAP1Q9UKB5 411 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 POLR3GO15318 223 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 GCNT3O95395 438 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 KNOP1Q1ED39 458 aaKnown RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 DPY19L2P1Q6NXN4 242 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 COG1Q8WTW3 980 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 SECISBP2LQ93073 1101 aaKnown RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 JADE2Q9NQC1 790 aa16.57■□□□□ 0.24
UBXN11-213ENST00000472155 ZHX1Q9UKY1 873 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-213ENST00000472155 ZNF536O15090 1300 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 GYS2P54840 703 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 GJB7Q6PEY0 223 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 ZC3H3Q8IXZ2 948 aaKnown RBP16.56■□□□□ 0.24
UBXN11-213ENST00000472155 CPXCR1Q8N123 301 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 FAM133AQ8N9E0 248 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 MSANTD4Q8NCY6 345 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 BANK1Q8NDB2 785 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 PACSIN1Q9BY11 444 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 ZNRF3Q9ULT6 936 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 RBBP6Q7Z6E9 1792 aaKnown RBP16.56■□□□□ 0.24
UBXN11-213ENST00000472155 RAPGEF1Q13905 1077 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-213ENST00000472155 BEND6Q5SZJ8 279 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-213ENST00000472155 MAEAQ7L5Y9 396 aa16.56■□□□□ 0.24
UBXN11-213ENST00000472155 CETN3O15182 167 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 EYA4O95677 639 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 ITGB5P18084 799 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 MAGEA1P43355 309 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
UBXN11-213ENST00000472155 RASA3Q14644 834 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 GRIPAP1Q4V328 841 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 NFRKBQ6P4R8 1299 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 ZNF662Q6ZS27 426 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 POLR3CQ9BUI4 534 aaPredicted RBP16.55■□□□□ 0.24
UBXN11-213ENST00000472155 GANQ9H2C0 597 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 ZMYM2Q9UBW7 1377 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 TGFB1I1O43294 461 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 C2orf54Q08AI8 447 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 C1orf186Q6ZWK4 172 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 NIM1KQ8IY84 436 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms