RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 GRIK4Q16099 956 aa22.83■■□□□ 1.25
CCDC78-208ENST00000471861 PCNX4Q63HM2 1172 aa22.83■■□□□ 1.25
CCDC78-208ENST00000471861 TSHZ1Q6ZSZ6 1077 aa22.83■■□□□ 1.25
CCDC78-208ENST00000471861 RTN4RL1Q86UN2 441 aaPredicted RBP22.83■■□□□ 1.25
CCDC78-208ENST00000471861 EFHBQ8N7U6 833 aa22.83■■□□□ 1.25
CCDC78-208ENST00000471861 PBXIP1Q96AQ6 731 aa22.83■■□□□ 1.25
CCDC78-208ENST00000471861 TUBE1Q9UJT0 475 aa22.83■■□□□ 1.25
CCDC78-208ENST00000471861 ATP9AO75110 1047 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 MARK3P27448 753 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 CD52P31358 61 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 PTPN5P54829 565 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 ZXDAP98168 799 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 TROAPQ12815 778 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 COASYQ13057 564 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 TRAF1Q13077 416 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 CBX2Q14781 532 aaPredicted RBP22.82■■□□□ 1.24
CCDC78-208ENST00000471861 USP17L6PQ6QN14 398 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 SMC5Q8IY18 1101 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 CMTR2Q8IYT2 770 aaKnown RBP22.82■■□□□ 1.24
CCDC78-208ENST00000471861 KLHL23Q8NBE8 558 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 BARX2Q9UMQ3 279 aaPredicted RBP22.82■■□□□ 1.24
CCDC78-208ENST00000471861 ZDBF2Q9HCK1 2354 aa22.82■■□□□ 1.24
CCDC78-208ENST00000471861 CFAP54Q96N23 3096 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 GSTTP1A0A1W2PQM5 241 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 KCNA2P16389 499 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 B4GALNT3Q6L9W6 998 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 POF1BQ8WVV4 589 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 PIBF1Q8WXW3 757 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 USP15Q9Y4E8 981 aaPredicted RBP22.81■■□□□ 1.24
CCDC78-208ENST00000471861 KAT6AQ92794 2004 aa22.81■■□□□ 1.24
CCDC78-208ENST00000471861 PLXNA4Q9HCM2 1894 aa22.8■■□□□ 1.24
CCDC78-208ENST00000471861 MEIS2O14770 477 aa22.8■■□□□ 1.24
CCDC78-208ENST00000471861 NRIP1P48552 1158 aa22.8■■□□□ 1.24
CCDC78-208ENST00000471861 GATMP50440 423 aa22.8■■□□□ 1.24
CCDC78-208ENST00000471861 MRPS6P82932 125 aaKnown RBP22.8■■□□□ 1.24
CCDC78-208ENST00000471861 PAN2Q504Q3 1202 aaKnown RBP22.8■■□□□ 1.24
CCDC78-208ENST00000471861 RSPH3Q86UC2 560 aa22.8■■□□□ 1.24
CCDC78-208ENST00000471861 MYO15AQ9UKN7 3530 aa22.79■■□□□ 1.24
CCDC78-208ENST00000471861 RBM10P98175 930 aaKnown RBP22.79■■□□□ 1.24
CCDC78-208ENST00000471861 NAALADL2Q58DX5 795 aa22.79■■□□□ 1.24
CCDC78-208ENST00000471861 RBM23Q86U06 439 aaKnown RBP22.79■■□□□ 1.24
CCDC78-208ENST00000471861 NPAS4Q8IUM7 802 aa22.79■■□□□ 1.24
CCDC78-208ENST00000471861 TAF6LQ9Y6J9 622 aa22.79■■□□□ 1.24
CCDC78-208ENST00000471861 HIP1O00291 1037 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 VCPP55072 806 aaKnown RBP22.78■■□□□ 1.24
CCDC78-208ENST00000471861 XRRA1Q6P2D8 792 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 CHD1LQ86WJ1 897 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 FBXL6Q8N531 539 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 VN1R2Q8NFZ6 395 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 PPP2R3CQ969Q6 453 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 ASIC4Q96FT7 647 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 FAM49AQ9H0Q0 323 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-208ENST00000471861 ERAP1Q9NZ08 941 aa22.78■■□□□ 1.24
CCDC78-208ENST00000471861 PIK3CDO00329 1044 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 IFIT3O14879 490 aaKnown RBP22.77■■□□□ 1.24
CCDC78-208ENST00000471861 ITGB5P18084 799 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 IGBP1P78318 339 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 NLRX1Q86UT6 975 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 SUGP1Q8IWZ8 645 aaKnown RBP22.77■■□□□ 1.24
CCDC78-208ENST00000471861 SMARCC2Q8TAQ2 1214 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 SEPT1Q8WYJ6 367 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 GPRASP2Q96D09 838 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 PCYT2Q99447 389 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 FAM86C1Q9NVL1 165 aa22.77■■□□□ 1.24
CCDC78-208ENST00000471861 ST18O60284 1047 aa22.76■■□□□ 1.23
CCDC78-208ENST00000471861 TMEM62Q0P6H9 643 aa22.76■■□□□ 1.23
CCDC78-208ENST00000471861 GIMAP8Q8ND71 665 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-208ENST00000471861 SUSD6Q92537 303 aa22.76■■□□□ 1.23
CCDC78-208ENST00000471861 PHF7Q9BWX1 381 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-208ENST00000471861 TMX1Q9H3N1 280 aa22.76■■□□□ 1.23
CCDC78-208ENST00000471861 PADI3Q9ULW8 664 aa22.76■■□□□ 1.23
CCDC78-208ENST00000471861 CACNA1HO95180 2353 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 CYP21A2P08686 494 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 INSRRP14616 1297 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 NUCB1Q02818 461 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 SIGLEC14Q08ET2 396 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 PKN1Q16512 942 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 GLG1Q92896 1179 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 RPGRIP1Q96KN7 1286 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 PRRX2Q99811 253 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 FTHL17Q9BXU8 183 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 PKD2L1Q9P0L9 805 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 TRPV2Q9Y5S1 764 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 SQORQ9Y6N5 450 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 IGSF9BQ9UPX0 1349 aa22.75■■□□□ 1.23
CCDC78-208ENST00000471861 SCG2P13521 617 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 ANTXR2P58335 489 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 WTAPQ15007 396 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 ATP8B4Q8TF62 1192 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 TRAPPC12Q8WVT3 735 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 SPZ1Q9BXG8 430 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 HCSTQ9UBK5 93 aa22.74■■□□□ 1.23
CCDC78-208ENST00000471861 LOXHD1Q8IVV2 1947 aa22.73■■□□□ 1.23
CCDC78-208ENST00000471861 PER2O15055 1255 aa22.73■■□□□ 1.23
CCDC78-208ENST00000471861 TRDNQ13061 729 aa22.73■■□□□ 1.23
CCDC78-208ENST00000471861 CUL5Q93034 780 aa22.73■■□□□ 1.23
CCDC78-208ENST00000471861 SMARCAD1Q9H4L7 1026 aa22.73■■□□□ 1.23
CCDC78-208ENST00000471861 UBIAD1Q9Y5Z9 338 aa22.73■■□□□ 1.23
CCDC78-208ENST00000471861 DMDP11532 3685 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 MGEA5O60502 916 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms