RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GRIN1Q05586 938 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DPYDQ12882 1025 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ANKRD20A4Q4UJ75 823 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ANKRD20A8PQ5CZ79 823 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ANKRD20A2Q5SQ80 823 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ANKRD20A1Q5TYW2 823 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PHF21AQ96BD5 680 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TUBGCP2Q9BSJ2 902 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 OSBPL10Q9BXB5 764 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KITP10721 976 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ESRRGP62508 458 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FAM133AQ8N9E0 248 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CHEK2O96017 543 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 FAM133BQ5BKY9 247 aaKnown RBP14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TRIML1Q8N9V2 468 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DACH2Q96NX9 599 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KCNQ3O43525 872 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SNX2O60749 519 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CAPZA2P47755 286 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SIK1P57059 783 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 LBRQ14739 615 aaKnown RBP14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 UBE2SQ16763 222 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DALRD3Q5D0E6 543 aaKnown RBP14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 THEM5Q8N1Q8 247 aa14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 JPH2Q9BR39 696 aaPredicted RBP14.23□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PRPF4O43172 522 aaKnown RBP eCLIP14.22□□□□□ -0.131e-7■□□□□ 8.1
NPHP3-ACAD11-201ENST00000471702 ORC4O43929 436 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SSTR3P32745 418 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SEMA3FQ13275 785 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ATG16L1Q676U5 607 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 E5RI56 91 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EPN1Q9Y6I3 576 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GOLGA8MH3BSY2 632 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SUN1O94901 812 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZBED1O96006 694 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZSCAN26Q16670 478 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 THNSL1Q8IYQ7 743 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZNF507Q8TCN5 953 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PPARGP37231 505 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CACNB3P54284 484 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TADA2BQ86TJ2 420 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ACCSQ96QU6 501 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 USP28Q96RU2 1077 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EPB41L5Q9HCM4 733 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TPCN1Q9ULQ1 816 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CAPN11Q9UMQ6 739 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 WDR17Q8IZU2 1322 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 NLGN1Q8N2Q7 840 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 LARP4BQ92615 738 aaKnown RBP14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ZMYM6O95789 1325 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KRT7P08729 469 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 BMP3P12645 472 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 EFHD1Q9BUP0 239 aa14.22□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 MT-ND3P03897 115 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 C2orf69Q8N8R5 385 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SYCE1LA8MT33 242 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 C21orf2O43822 256 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PEX3P56589 373 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TMED1Q13445 227 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 E2F5Q15329 346 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KDELC2Q7Z4H8 507 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 TBCKQ8TEA7 893 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ASIC4Q96FT7 647 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 A0A087WWV3 80 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 CFAP69A5D8W1 941 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 DDAH1O94760 285 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ANGPT1Q15389 498 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 BBS9Q3SYG4 887 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 PBXIP1Q96AQ6 731 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 KLHL8Q9P2G9 620 aaPredicted RBP14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 SMYD3Q9H7B4 428 aa14.21□□□□□ -0.13
NPHP3-ACAD11-201ENST00000471702 GSPT1P15170 499 aaKnown RBP14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NFKBIAP25963 317 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FAM117BQ6P1L5 589 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CHMP1BQ7LBR1 199 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DDX53Q86TM3 631 aaKnown RBP14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SLC7A5Q01650 507 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PTH1RQ03431 593 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NRBF2Q96F24 287 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DRC3Q9H069 523 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NEUROD4Q9HD90 331 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 COPRSQ9NQ92 184 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SELENONQ9NZV5 590 aa14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 COPG1Q9Y678 874 aaKnown RBP14.21□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SKIP12755 728 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PLS3P13797 630 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CCT5P48643 541 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 USP14P54578 494 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NME3Q13232 169 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SLC10A5Q5PT55 438 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ULK4Q96C45 1275 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms