RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SERTAD1Q9UHV2 236 aa21.53■■□□□ 1.04
PSPC1-203ENST00000471658 KIAA1024Q9UPX6 916 aa21.53■■□□□ 1.04
PSPC1-203ENST00000471658 NOP56O00567 594 aaKnown RBP21.52■■□□□ 1.04
PSPC1-203ENST00000471658 ZBTB39O15060 712 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 P4HBP07237 508 aaKnown RBP21.52■■□□□ 1.04
PSPC1-203ENST00000471658 PSAPP07602 524 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 TCF7P36402 384 aaPredicted RBP21.52■■□□□ 1.04
PSPC1-203ENST00000471658 PSMC6P62333 389 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 TMEM119Q4V9L6 283 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 RRAGBQ5VZM2 374 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 HAUS3Q68CZ6 603 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 MIS18BP1Q6P0N0 1132 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 TLK2Q86UE8 772 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 EMID1Q96A84 441 aaPredicted RBP21.52■■□□□ 1.04
PSPC1-203ENST00000471658 CALML4Q96GE6 196 aa21.52■■□□□ 1.04
PSPC1-203ENST00000471658 DDX19AQ9NUU7 478 aaKnown RBP21.52■■□□□ 1.04
PSPC1-203ENST00000471658 TRAK2O60296 914 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 PTMSP20962 102 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 E2F4Q16254 413 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 NAALADL2Q58DX5 795 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 HYIQ5T013 277 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 UTP14CQ5TAP6 766 aaKnown RBP21.51■■□□□ 1.03
PSPC1-203ENST00000471658 RDM1Q8NG50 284 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 CDK5RAP3Q96JB5 506 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 LXNQ9BS40 222 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 TUFT1Q9NNX1 390 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 CCDC39Q9UFE4 941 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 E9PMD0 336 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 MBD3O95983 291 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 TRMT1LQ7Z2T5 733 aaKnown RBP21.51■■□□□ 1.03
PSPC1-203ENST00000471658 PPTC7Q8NI37 304 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 BLOC1S4Q9NUP1 217 aa21.51■■□□□ 1.03
PSPC1-203ENST00000471658 IGKV6D-21A0A0A0MT36 114 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 BACH1O14867 736 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 ACTN4O43707 911 aaKnown RBP21.5■■□□□ 1.03
PSPC1-203ENST00000471658 ZNF862O60290 1169 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 DUSP11O75319 330 aaKnown RBP21.5■■□□□ 1.03
PSPC1-203ENST00000471658 MYCP01106 439 aaPredicted RBP21.5■■□□□ 1.03
PSPC1-203ENST00000471658 STAT6P42226 847 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 QARSP47897 775 aaKnown RBP21.5■■□□□ 1.03
PSPC1-203ENST00000471658 BEX3Q00994 111 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 TRIM50Q86XT4 487 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 STK24Q9Y6E0 443 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 KDM3AQ9Y4C1 1321 aa21.5■■□□□ 1.03
PSPC1-203ENST00000471658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.49■■□□□ 1.03
PSPC1-203ENST00000471658 CTAGE5O15320 804 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 PGK1P00558 417 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 ATP4AP20648 1035 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 GRAMD1CQ8IYS0 662 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 IQUBQ8NA54 791 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 NEK9Q8TD19 979 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 PIGOQ8TEQ8 1089 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 STAMQ92783 540 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 AP5M1Q9H0R1 490 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 ZNF302Q9NR11 478 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 Q9Y3F1 56 aa21.49■■□□□ 1.03
PSPC1-203ENST00000471658 TMEM150BA6NC51 233 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 MYADML2A6NDP7 307 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 MMP3P08254 477 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 PSMC5P62195 406 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 SLC9C1Q4G0N8 1177 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 PDXDC2PQ6P474 469 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 ZSWIM4Q9H7M6 989 aa21.48■■□□□ 1.03
PSPC1-203ENST00000471658 HMX1Q9NP08 348 aaPredicted RBP21.48■■□□□ 1.03
PSPC1-203ENST00000471658 MAFBQ9Y5Q3 323 aaPredicted RBP21.48■■□□□ 1.03
PSPC1-203ENST00000471658 A6NJR5 290 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 LGR5O75473 907 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 STBD1O95210 358 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 RARBP10826 455 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 STAT5BP51692 787 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 DHX8Q14562 1220 aaKnown RBP21.47■■□□□ 1.03
PSPC1-203ENST00000471658 MCM6Q14566 821 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 MTFR1Q15390 333 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 KLHL40Q2TBA0 621 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 KRBA2Q6ZNG9 492 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 NT5C3AQ9H0P0 336 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 UNC93B1Q9H1C4 597 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 DDX20Q9UHI6 824 aaKnown RBP21.47■■□□□ 1.03
PSPC1-203ENST00000471658 SYNRGQ9UMZ2 1314 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 SLC26A4O43511 780 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 KINO60870 393 aaKnown RBP21.47■■□□□ 1.03
PSPC1-203ENST00000471658 SLFN14P0C7P3 912 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 GJA9P57773 515 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 CAMK4Q16566 473 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 FBXO46Q6PJ61 603 aaPredicted RBP21.47■■□□□ 1.03
PSPC1-203ENST00000471658 CNNM3Q8NE01 707 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 RAD54LQ92698 747 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 MTRQ99707 1265 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 SH2D3AQ9BRG2 576 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 TMEM63CQ9P1W3 806 aa21.47■■□□□ 1.03
PSPC1-203ENST00000471658 IGSF9BQ9UPX0 1349 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 PPFIA4O75335 1185 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 LGALS2P05162 132 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 C6orf222P0C671 652 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-203ENST00000471658 ZNF286BP0CG31 522 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 CAVIN1Q6NZI2 390 aaKnown RBP21.46■■□□□ 1.03
PSPC1-203ENST00000471658 C4orf19Q8IY42 314 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 AFAP1L1Q8TED9 768 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 GLG1Q92896 1179 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 ATP6V0A1Q93050 837 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms