RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 MIER3Q7Z3K6 550 aa28.41■■■□□ 2.14
COL15A1-203ENST00000471477 BRAPQ7Z569 592 aa28.41■■■□□ 2.14
COL15A1-203ENST00000471477 MTMR9Q96QG7 549 aa28.41■■■□□ 2.14
COL15A1-203ENST00000471477 RNPEPQ9H4A4 650 aa28.41■■■□□ 2.14
COL15A1-203ENST00000471477 ZNF302Q9NR11 478 aa28.41■■■□□ 2.14
COL15A1-203ENST00000471477 SMIM10L2AP0DMW4 78 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 SMIM10L2BP0DMW5 78 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 SYN1P17600 705 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 PPP2R5CQ13362 524 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 GDF6Q6KF10 455 aaPredicted RBP28.4■■■□□ 2.14
COL15A1-203ENST00000471477 PLPPR4Q7Z2D5 763 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 SH3RF1Q7Z6J0 888 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 AFAP1L1Q8TED9 768 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 PCDH10Q9P2E7 1040 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 LTBP2Q14767 1821 aa28.4■■■□□ 2.14
COL15A1-203ENST00000471477 RDM1Q8NG50 284 aa28.39■■■□□ 2.14
COL15A1-203ENST00000471477 TMEM39AQ9NV64 488 aa28.39■■■□□ 2.14
COL15A1-203ENST00000471477 GABBR1Q9UBS5 961 aa28.39■■■□□ 2.14
COL15A1-203ENST00000471477 MYH15Q9Y2K3 1946 aa28.39■■■□□ 2.13
COL15A1-203ENST00000471477 EML1O00423 815 aa28.38■■■□□ 2.13
COL15A1-203ENST00000471477 TXKP42681 527 aa28.38■■■□□ 2.13
COL15A1-203ENST00000471477 RESTQ13127 1097 aa28.38■■■□□ 2.13
COL15A1-203ENST00000471477 PDXDC2PQ6P474 469 aa28.38■■■□□ 2.13
COL15A1-203ENST00000471477 TTC12Q9H892 705 aaPredicted RBP28.38■■■□□ 2.13
COL15A1-203ENST00000471477 PCDHA12Q9UN75 941 aa28.38■■■□□ 2.13
COL15A1-203ENST00000471477 OR52Z1P0C646 297 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 SPIRE1Q08AE8 756 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 HIC1Q14526 733 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 PLCB4Q15147 1175 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 PTGISQ16647 500 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.37■■■□□ 2.13
COL15A1-203ENST00000471477 PRKAG2Q9UGJ0 569 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 TBX21Q9UL17 535 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 CEP290O15078 2479 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 IGSF9BQ9UPX0 1349 aa28.37■■■□□ 2.13
COL15A1-203ENST00000471477 TRIM43BA6NCK2 446 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 H0YGN5 161 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 SLC26A2P50443 739 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 NCAPH2Q6IBW4 605 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 C4orf32Q8N8J7 132 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 TRIM43Q96BQ3 446 aaPredicted RBP28.36■■■□□ 2.13
COL15A1-203ENST00000471477 TRPC6Q9Y210 931 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 NOD1Q9Y239 953 aa28.36■■■□□ 2.13
COL15A1-203ENST00000471477 MAFBQ9Y5Q3 323 aaPredicted RBP28.36■■■□□ 2.13
COL15A1-203ENST00000471477 C17orf102A2RUQ5 167 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 HOXC8P31273 242 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 ZNF200P98182 395 aaPredicted RBP28.35■■■□□ 2.13
COL15A1-203ENST00000471477 UGCGQ16739 394 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 CTAGE1Q96RT6 745 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 SETD4Q9NVD3 440 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 KIAA0355O15063 1070 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 CYP2C9P11712 490 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 ATP4AP20648 1035 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 PPFIA1Q13136 1202 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 PTGDRQ13258 359 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 LMBR1Q8WVP7 490 aa28.35■■■□□ 2.13
COL15A1-203ENST00000471477 POTEB3A0JP26 581 aa28.34■■■□□ 2.13
COL15A1-203ENST00000471477 POTEBQ6S5H4 581 aa28.34■■■□□ 2.13
COL15A1-203ENST00000471477 CKAP2LQ8IYA6 745 aa28.34■■■□□ 2.13
COL15A1-203ENST00000471477 NRCAMQ92823 1304 aa28.33■■■□□ 2.13
COL15A1-203ENST00000471477 ZNF862O60290 1169 aa28.33■■■□□ 2.13
COL15A1-203ENST00000471477 GRIK4Q16099 956 aa28.33■■■□□ 2.13
COL15A1-203ENST00000471477 TRMT1LQ7Z2T5 733 aaKnown RBP28.33■■■□□ 2.13
COL15A1-203ENST00000471477 BANK1Q8NDB2 785 aa28.33■■■□□ 2.13
COL15A1-203ENST00000471477 ATP8B4Q8TF62 1192 aa28.33■■■□□ 2.13
COL15A1-203ENST00000471477 ATP6V0A1Q93050 837 aa28.33■■■□□ 2.13
COL15A1-203ENST00000471477 POTEMA6NI47 508 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 GNAT1P11488 350 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 PDIA4P13667 645 aaKnown RBP28.32■■■□□ 2.12
COL15A1-203ENST00000471477 INSRRP14616 1297 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 ITGB8P26012 769 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 EPHA7Q15375 998 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 FAM173BQ6P4H8 233 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 PPP1R12CQ9BZL4 782 aa28.32■■■□□ 2.12
COL15A1-203ENST00000471477 ZSCAN16Q9H4T2 348 aaPredicted RBP28.32■■■□□ 2.12
COL15A1-203ENST00000471477 TREHO43280 583 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 HBP1O60381 514 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 RAG1P15918 1043 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 TECP42680 631 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 IGBP1P78318 339 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 ADAM17P78536 824 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 PRKCEQ02156 737 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 PKP1Q13835 747 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 FOXD4L5Q5VV16 416 aaPredicted RBP28.31■■■□□ 2.12
COL15A1-203ENST00000471477 FOXD4L4Q8WXT5 416 aaPredicted RBP28.31■■■□□ 2.12
COL15A1-203ENST00000471477 TNPO1Q92973 898 aaKnown RBP28.31■■■□□ 2.12
COL15A1-203ENST00000471477 NOC4LQ9BVI4 516 aaKnown RBP28.31■■■□□ 2.12
COL15A1-203ENST00000471477 HIPK3Q9H422 1215 aa28.31■■■□□ 2.12
COL15A1-203ENST00000471477 TANC1Q9C0D5 1861 aa28.3■■■□□ 2.12
COL15A1-203ENST00000471477 LAD1O00515 517 aa28.3■■■□□ 2.12
COL15A1-203ENST00000471477 ATP2C1P98194 919 aaPredicted RBP28.3■■■□□ 2.12
COL15A1-203ENST00000471477 BBXQ8WY36 941 aaPredicted RBP28.3■■■□□ 2.12
COL15A1-203ENST00000471477 OATP04181 439 aa28.29■■■□□ 2.12
COL15A1-203ENST00000471477 ZSCAN22P10073 491 aaPredicted RBP28.29■■■□□ 2.12
COL15A1-203ENST00000471477 TMEM266Q2M3C6 531 aa28.29■■■□□ 2.12
COL15A1-203ENST00000471477 UMODL1Q5DID0 1318 aa28.29■■■□□ 2.12
COL15A1-203ENST00000471477 TRAPPC12Q8WVT3 735 aa28.29■■■□□ 2.12
COL15A1-203ENST00000471477 DHX38Q92620 1227 aaKnown RBP28.29■■■□□ 2.12
COL15A1-203ENST00000471477 DYDC2Q96IM9 177 aa28.29■■■□□ 2.12
COL15A1-203ENST00000471477 FAM167AQ96KS9 214 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms