RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ARSHQ5FYA8 562 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 FOXR2Q6PJQ5 311 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 ABRAQ8N0Z2 381 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 FAM43AQ8N2R8 423 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 GUF1Q8N442 669 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 BANK1Q8NDB2 785 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 FGD4Q96M96 766 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 REEP2Q9BRK0 252 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 JPH1Q9HDC5 661 aaPredicted RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 PANK4Q9NVE7 773 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 WRAP73Q9P2S5 460 aaPredicted RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 DBR1Q9UK59 544 aaKnown RBP10.44□□□□□ -0.74
VPS52-216ENST00000471309 MAPK8IP1Q9UQF2 711 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 PLXNA1Q9UIW2 1896 aa10.44□□□□□ -0.74
VPS52-216ENST00000471309 ADGRA2Q96PE1 1338 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 MANSC4A6NHS7 340 aaPredicted RBP10.43□□□□□ -0.74
VPS52-216ENST00000471309 TBCAO75347 108 aaKnown RBP10.43□□□□□ -0.74
VPS52-216ENST00000471309 SERPINC1P01008 464 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 PTMAP06454 111 aaKnown RBP10.43□□□□□ -0.74
VPS52-216ENST00000471309 TPM3P06753 285 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 GAP43P17677 238 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 CCNE1P24864 410 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 STX17P56962 302 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 PSMC5P62195 406 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 GIT2Q14161 759 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 FAM110CQ1W6H9 321 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 RINT1Q6NUQ1 792 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 RGMBQ6NW40 437 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 TTI2Q6NXR4 508 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 SAPCD2Q86UD0 394 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 C4orf19Q8IY42 314 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 ANKRD13CQ8N6S4 541 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 MORC4Q8TE76 937 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 NOC3LQ8WTT2 800 aaKnown RBP10.43□□□□□ -0.74
VPS52-216ENST00000471309 P2RX5Q93086 422 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 PTPN18Q99952 460 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 RUSC1Q9BVN2 902 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 XPO4Q9C0E2 1151 aaKnown RBP10.43□□□□□ -0.74
VPS52-216ENST00000471309 PORCNQ9H237 461 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 R3HDMLQ9H3Y0 253 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 EFCC1Q9HA90 598 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 SAMSN1Q9NSI8 373 aaKnown RBP10.43□□□□□ -0.74
VPS52-216ENST00000471309 IFNKQ9P0W0 207 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 ODF2LQ9ULJ1 636 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 SAMM50Q9Y512 469 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 PCDHA10Q9Y5I2 948 aa10.43□□□□□ -0.74
VPS52-216ENST00000471309 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 NPHP3-ACAD11A0A0J9YXS1 232 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 DKC1O60832 514 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS52-216ENST00000471309 KIF20AO95235 890 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 PGK2P07205 417 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 SLC10A3P09131 477 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 GUCY2CP25092 1073 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 ZNF157P51786 506 aaPredicted RBP10.42□□□□□ -0.74
VPS52-216ENST00000471309 LRRC63Q05C16 580 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 FSTL1Q12841 308 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 TPD52L1Q16890 204 aaPredicted RBP10.42□□□□□ -0.74
VPS52-216ENST00000471309 CENPPQ6IPU0 288 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 C1orf186Q6ZWK4 172 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 DRC7Q8IY82 874 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 PIGOQ8TEQ8 1089 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 ATP6V0A1Q93050 837 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 HPS3Q969F9 1004 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 THAP9Q9H5L6 903 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 SLC39A2Q9NP94 309 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 PCDHA2Q9Y5H9 948 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 COL4A3BPQ9Y5P4 624 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 TLL2Q9Y6L7 1015 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 WDR81Q562E7 1941 aa10.42□□□□□ -0.74
VPS52-216ENST00000471309 IGSF9BQ9UPX0 1349 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 ARHGEF35A5YM69 484 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 TRIM49BA6NDI0 452 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 ASB14A6NK59 587 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 STRNO43815 780 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 PSAPP07602 524 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 TGFB3P10600 412 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 CDK11BP21127 795 aaKnown RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 UBA1P22314 1058 aaKnown RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 EEF1GP26641 437 aaKnown RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 YWHABP31946 246 aaKnown RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 RARRES1P49788 294 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 ZNF131P52739 623 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 PMS1P54277 932 aaKnown RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 UBASH3AP57075 661 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 ACTR2P61160 394 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 CACNB1Q02641 598 aaPredicted RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 RAD51AP2Q09MP3 1159 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 UGCGQ16739 394 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 HERC4Q5GLZ8 1057 aaPredicted RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 MIS18BP1Q6P0N0 1132 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 KCNV1Q6PIU1 500 aa10.41□□□□□ -0.74
VPS52-216ENST00000471309 APTXQ7Z2E3 356 aaKnown RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
VPS52-216ENST00000471309 SFR1Q86XK3 245 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms