RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SPATS1Q496A3 300 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 OSTM1Q86WC4 334 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 KCND1Q9NSA2 647 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 ZFP69BQ9UJL9 534 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 KNG1P01042 644 aa8.37□□□□□ -1.07
CCDC39-202ENST00000471307 NFATC3Q12968 1075 aa8.37□□□□□ -1.07
CCDC39-202ENST00000471307 HHIPL2Q6UWX4 724 aa8.37□□□□□ -1.07
CCDC39-202ENST00000471307 PTRH1Q86Y79 214 aaKnown RBP8.37□□□□□ -1.07
CCDC39-202ENST00000471307 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
CCDC39-202ENST00000471307 SLC7A14Q8TBB6 771 aa8.37□□□□□ -1.07
CCDC39-202ENST00000471307 RBM15Q96T37 977 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC39-202ENST00000471307 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
CCDC39-202ENST00000471307 FAM90A27PA6NNH2 459 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 B4GALT3O60512 393 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 KLHL18O94889 574 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 KRT15P19012 456 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 JAM2P57087 298 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 HERVK_113P62684 666 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 TBC1D10BQ4KMP7 808 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-202ENST00000471307 PRRT2Q7Z6L0 340 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-202ENST00000471307 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 SMURF1Q9HCE7 757 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 ADAM29Q9UKF5 820 aa8.36□□□□□ -1.07
CCDC39-202ENST00000471307 PLD2O14939 933 aa8.35□□□□□ -1.07
CCDC39-202ENST00000471307 LAMTOR5O43504 91 aa8.35□□□□□ -1.07
CCDC39-202ENST00000471307 DNM2P50570 870 aa8.35□□□□□ -1.07
CCDC39-202ENST00000471307 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
CCDC39-202ENST00000471307 REXO1L1PQ8IX06 675 aa8.35□□□□□ -1.07
CCDC39-202ENST00000471307 RASGRP1O95267 797 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 Q6ZUG5 572 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 BRAPQ7Z569 592 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 KBTBD2Q8IY47 623 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 TTC9BQ8N6N2 239 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 STPG3Q8N7X2 389 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 NUDT10Q8NFP7 164 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 SCLYQ96I15 445 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 AJUBAQ96IF1 538 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 TRIM39Q9HCM9 518 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 ARHGAP28Q9P2N2 729 aa8.34□□□□□ -1.07
CCDC39-202ENST00000471307 TCRBV16S1A1N1A0A5B0 115 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 H0Y858 1186 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 IL18BPO95998 194 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 C4BPAP04003 597 aaKnown RBP8.33□□□□□ -1.08
CCDC39-202ENST00000471307 ADRB1P08588 477 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 GLRBP48167 497 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 BMS1Q14692 1282 aaKnown RBP8.33□□□□□ -1.08
CCDC39-202ENST00000471307 ZNF827Q17R98 1081 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 FNDC3BQ53EP0 1204 aaKnown RBP8.33□□□□□ -1.08
CCDC39-202ENST00000471307 BORCS6Q96GS4 357 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 SAMD11Q96NU1 681 aa8.33□□□□□ -1.08
CCDC39-202ENST00000471307 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.32□□□□□ -1.08
CCDC39-202ENST00000471307 B4E1Z4 1266 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 CUTAO60888 179 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 PTGS1P23219 599 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 AOAHP28039 575 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 PHF19Q5T6S3 580 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 TACO1Q9BSH4 297 aaKnown RBP8.32□□□□□ -1.08
CCDC39-202ENST00000471307 KATNBL1Q9H079 304 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 SLC39A2Q9NP94 309 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 COQ6Q9Y2Z9 468 aa8.32□□□□□ -1.08
CCDC39-202ENST00000471307 ZNF536O15090 1300 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 PRAMEF25A6NGN4 478 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 EPHB4P54760 987 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 PPP2CBP62714 309 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 PPP2CAP67775 309 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 GLB1LQ6UWU2 654 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 ARHGEF18Q6ZSZ5 1173 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 CXXC5Q7LFL8 322 aaKnown RBP8.31□□□□□ -1.08
CCDC39-202ENST00000471307 OVCH1Q7RTY7 1134 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 RALYLQ86SE5 291 aaKnown RBP8.31□□□□□ -1.08
CCDC39-202ENST00000471307 NOSTRINQ8IVI9 506 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 CISD2Q8N5K1 135 aaKnown RBP8.31□□□□□ -1.08
CCDC39-202ENST00000471307 SSBP3Q9BWW4 388 aaPredicted RBP8.31□□□□□ -1.08
CCDC39-202ENST00000471307 ZSWIM4Q9H7M6 989 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 INCENPQ9NQS7 918 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 ZDHHC9Q9Y397 364 aa8.31□□□□□ -1.08
CCDC39-202ENST00000471307 MAGEA10P43363 369 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-202ENST00000471307 FGD2Q7Z6J4 655 aa8.3□□□□□ -1.08
CCDC39-202ENST00000471307 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
CCDC39-202ENST00000471307 KCNH7Q9NS40 1196 aa8.3□□□□□ -1.08
CCDC39-202ENST00000471307 FBXO10Q9UK96 956 aa8.3□□□□□ -1.08
CCDC39-202ENST00000471307 SLC12A8A0AV02 714 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 KCNA6P17658 529 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 POLD1P28340 1107 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 CSF2RBP32927 897 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 NFKB2Q00653 900 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 SYNPOQ8N3V7 929 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 SMPD4Q9NXE4 827 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 GALNT8Q9NY28 637 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 BTBD7Q9P203 1132 aa8.29□□□□□ -1.08
CCDC39-202ENST00000471307 SDHAP31040 664 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 IGFALSP35858 605 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 SQSTM1Q13501 440 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 STILQ15468 1287 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 TMEM177Q53S58 311 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 LCE5AQ5TCM9 118 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms