RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 PCDHGB7Q9Y5F8 929 aa3.23□□□□□ -1.89
CCNL1-214ENST00000471247 NPFFR2Q9Y5X5 522 aa3.23□□□□□ -1.89
CCNL1-214ENST00000471247 UBOX5O94941 541 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 NPTXRO95502 500 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CAVIN2O95810 425 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 PTGS1P23219 599 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 RNF4P78317 190 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ACTN3Q08043 901 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 SEPT6Q14141 434 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 UNC5AQ6ZN44 842 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 NLRC3Q7RTR2 1065 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 THAP5Q7Z6K1 395 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 TAX1BP1Q86VP1 789 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 FAM20CQ8IXL6 584 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 DMRTC2Q8IXT2 367 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ZNF397Q8NF99 534 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 THAP3Q8WTV1 239 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ABTB1Q969K4 478 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 TBC1D31Q96DN5 1066 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 LRRCC1Q9C099 1032 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 RRAGCQ9HB90 399 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 HYPKQ9NX55 129 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ACTR10Q9NZ32 417 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 UBP1Q9NZI7 540 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 USP21Q9UK80 565 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ODF2LQ9ULJ1 636 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ANK1P16157 1881 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 LTBP3Q9NS15 1303 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 RFX7Q2KHR2 1363 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CCDC160A6NGH7 325 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 EOMESO95936 686 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 PRNPP04156 253 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 FGFR1P11362 822 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CASTP20810 708 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 OAS2P29728 719 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 YARSP54577 528 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 AKAP17AQ02040 695 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 GSTM4Q03013 218 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 APOBRQ0VD83 1088 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ERCC6LQ2NKX8 1250 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 BBS9Q3SYG4 887 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 C9orf131Q5VYM1 1079 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 MICALCLQ6ZW33 695 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CCAR1Q8IX12 1150 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 FAM169BQ8N8A8 192 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CTCFLQ8NI51 663 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 SYTL5Q8TDW5 730 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 LACRTQ9GZZ8 138 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 YY1AP1Q9H869 796 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 TYW1Q9NV66 732 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ZNHIT6Q9NWK9 470 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ZNF215Q9UL58 517 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 MAPK8IP3Q9UPT6 1336 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 USP34Q70CQ2 3546 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 EBAG9O00559 213 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 PFDN1O60925 122 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 U2AF1L5P0DN76 240 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 PAX7P23759 505 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 U2AF1Q01081 240 aaKnown RBP eCLIP3.22□□□□□ -1.899e-31■■■■■ 32.9
CCNL1-214ENST00000471247 TRIM28Q13263 835 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 SEPT7Q16181 437 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ZNF772Q68DY9 489 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 OVOS1Q6IE37 1185 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 GDF6Q6KF10 455 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 GPAT2Q6NUI2 795 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 TOM1L2Q6ZVM7 507 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ANKS3Q6ZW76 656 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 KIAA1328Q86T90 577 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 RNF168Q8IYW5 571 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 Q8N1Y9 231 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 FBXL16Q8N461 479 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 UBASH3BQ8TF42 649 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CYB5D2Q8WUJ1 264 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 ATRIPQ8WXE1 791 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CCDC140Q96MF4 163 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 STAP2Q9UGK3 403 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 TMA7Q9Y2S6 64 aaKnown RBP3.22□□□□□ -1.89
CCNL1-214ENST00000471247 SNX11Q9Y5W9 270 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 CAPN7Q9Y6W3 813 aa3.22□□□□□ -1.89
CCNL1-214ENST00000471247 NEDD4P46934 1319 aa3.21□□□□□ -1.89
CCNL1-214ENST00000471247 GOLGA6L7A0A1B0GV03 622 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 RNF225M0QZC1 329 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 SMAD7O15105 426 aaKnown RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 EIF3JO75822 258 aaKnown RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 BAG4O95429 457 aaKnown RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 NAT2P11245 290 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 AMPHP49418 695 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 CCT2P78371 535 aaKnown RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 MBTPS1Q14703 1052 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 ZRSR2Q15696 482 aaKnown RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 RABL6Q3YEC7 729 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-214ENST00000471247 ODF2Q5BJF6 829 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 PRRT3Q5FWE3 981 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 TRIM68Q6AZZ1 485 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 MCTP2Q6DN12 878 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 SDE2Q6IQ49 451 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 GIMAP6Q6P9H5 292 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 BRINP3Q76B58 766 aa3.21□□□□□ -1.9
CCNL1-214ENST00000471247 KRT28Q7Z3Y7 464 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms