RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SKIP12755 728 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 CALB2P22676 271 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 SLCO1A2P46721 670 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 GJA8P48165 433 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 PDE6CP51160 858 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 KIF11P52732 1056 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 BPIFB4P59827 614 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 ERVK-9P63128 1117 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 FKBP4Q02790 459 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS50-210ENST00000471188 MCL1Q07820 350 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 SSRP1Q08945 709 aaKnown RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 UAP1Q16222 522 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 GBP7Q8N8V2 638 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 C1orf131Q8NDD1 294 aaKnown RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 SYMPKQ92797 1274 aaKnown RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 HLA-CQ95604 372 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 DYDC2Q96IM9 177 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 DDX50Q9BQ39 737 aaKnown RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 LZTS2Q9BRK4 669 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 PRR14Q9BWN1 585 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 TLR10Q9BXR5 811 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 AP1M1Q9BXS5 423 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 MMRN2Q9H8L6 949 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 RNPEPL1Q9HAU8 725 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 FAM207AQ9NSI2 230 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 CCDC87Q9NVE4 849 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 FGFR1OP2Q9NVK5 253 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 USP15Q9Y4E8 981 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 LGALS16A8MUM7 142 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ABLIM1O14639 778 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 KCNK3O14649 394 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ZNF213O14771 459 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 NVLO15381 856 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 DAPK3O43293 454 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ZBTB43O43298 467 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 PAEPP09466 180 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 PRLRP16471 622 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 FUT4P22083 530 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 EIF4BP23588 611 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 CA8P35219 290 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 FLT3P36888 993 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 EIF4A3P38919 411 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 PTDSS1P48651 473 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 DNM2P50570 870 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 CBX3Q13185 183 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 HLFQ16534 295 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 SGSM1Q2NKQ1 1148 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 TNNI3KQ59H18 835 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 RILPL1Q5EBL4 403 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 SH2D4BQ5SQS7 431 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 INTS8Q75QN2 995 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 ANKRD42Q8N9B4 389 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 PHC3Q8NDX5 983 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 PIGOQ8TEQ8 1089 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 STK32AQ8WU08 396 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ANKRD27Q96NW4 1050 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 TRAPPC9Q96Q05 1148 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 MTFR1LQ9H019 292 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 EXOC1Q9NV70 894 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 PAG1Q9NWQ8 432 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 CTTNBP2NLQ9P2B4 639 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 RWDD2AQ9UIY3 292 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ZNF711Q9Y462 761 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 LRRC42Q9Y546 428 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 FPGT-TNNI3KV9GXZ4 949 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 MYH7BA7E2Y1 1941 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 A0A087X0B3 334 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 TCP11X1B4DZS4 312 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ZNF263O14978 683 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ATP9AO75110 1047 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 PALMO75781 387 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 GSTA2P09210 222 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 CCNFP41002 786 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 CD151P48509 253 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 NLRP5P59047 1200 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 MAP2K5Q13163 448 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 CCDC92Q53HC0 331 aaPredicted RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 ZNF449Q6P9G9 518 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 RINLQ6ZS11 566 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 RIC3Q7Z5B4 369 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 KSR1Q8IVT5 923 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ARHGEF2Q92974 986 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 CLMNQ96JQ2 1002 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ZNF317Q96PQ6 595 aaPredicted RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS50-210ENST00000471188 TUBGCP2Q9BSJ2 902 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 DDX47Q9H0S4 455 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 ISCUQ9H1K1 167 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 KCNK9Q9NPC2 374 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 METTL5Q9NRN9 209 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 KLHL14Q9P2G3 628 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 SRPRBQ9Y5M8 271 aaKnown RBP4.59□□□□□ -1.67
VPS50-210ENST00000471188 MYH7P12883 1935 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ANKRD26Q9UPS8 1709 aa4.59□□□□□ -1.67
VPS50-210ENST00000471188 ABCA3Q99758 1704 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 CCDC160A6NGH7 325 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 LRRC10BA6NIK2 292 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 H7C1D1 291 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 SNX3O60493 162 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 VIL1P09327 827 aaKnown RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms