RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 PLCD3Q8N3E9 789 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 AFG1LQ8WV93 481 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 KIF1BPQ96EK5 621 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 ZNF512BQ96KM6 892 aaPredicted RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 NECTIN4Q96NY8 510 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 UBL7Q96S82 380 aaPredicted RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 ALG1Q9BT22 464 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 CRNKL1Q9BZJ0 848 aaKnown RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 CCDC8Q9H0W5 538 aaPredicted RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 KCNK12Q9HB15 430 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 IL1RAPL2Q9NP60 686 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 CYP26B1Q9NR63 512 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 NEUROG3Q9Y4Z2 214 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 SHROOM3Q8TF72 1996 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 DENND4AQ7Z401 1863 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 RSPH10B2B2RC85 870 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 KPNA6O60684 536 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 EIF5BO60841 1220 aaKnown RBP6.94□□□□□ -1.3
VARS-222ENST00000470953 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 EOMESO95936 686 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 RSPH10BP0C881 870 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 SRGAP2BP0DMP2 458 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 ALDH5A1P51649 535 aaPredicted RBP6.94□□□□□ -1.3
VARS-222ENST00000470953 PTK7Q13308 1070 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 PPP2R5BQ15173 497 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 C12orf60Q5U649 245 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 NSMFQ6X4W1 530 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
VARS-222ENST00000470953 FEZF2Q8TBJ5 459 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 MICAL1Q8TDZ2 1067 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 GPATCH3Q96I76 525 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 ADAM7Q9H2U9 754 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 ARMT1Q9H993 441 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 DBNLQ9UJU6 430 aaKnown RBP6.94□□□□□ -1.3
VARS-222ENST00000470953 FEM1BQ9UK73 627 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
VARS-222ENST00000470953 MSRB2Q9Y3D2 182 aa6.94□□□□□ -1.3
VARS-222ENST00000470953 MRPL42Q9Y6G3 142 aaKnown RBP6.94□□□□□ -1.3
VARS-222ENST00000470953 GREB1LQ9C091 1923 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 TCRBV5S4A2TA0A5A2 114 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 ENO4A6NNW6 628 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 TMEM232C9JQI7 657 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 TK2O00142 265 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 IGSF3O75054 1194 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 RAB11FIP3O75154 756 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 CENPBP07199 599 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 TXNP10599 105 aaKnown RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 HOXB8P17481 243 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 THPOP40225 353 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 BAATQ14032 418 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 BTG3Q14201 252 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 BRDTQ58F21 947 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 C20orf194Q5TEA3 1177 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 CES5AQ6NT32 575 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 STK11IPQ8N1F8 1099 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 C7orf31Q8N865 590 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 GPR152Q8TDT2 470 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 RSAD2Q8WXG1 361 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 ZNF689Q96CS4 500 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 DNAJC2Q99543 621 aaKnown RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 CDCA3Q99618 268 aaPredicted RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 MKNK1Q9BUB5 465 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 ARHGEF3Q9NR81 526 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 ZBTB40Q9NUA8 1239 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 DBR1Q9UK59 544 aaKnown RBP6.93□□□□□ -1.3
VARS-222ENST00000470953 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 NOTCH2Q04721 2471 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 EMSYQ7Z589 1322 aa6.93□□□□□ -1.3
VARS-222ENST00000470953 ATXN7O15265 892 aaPredicted RBP6.92□□□□□ -1.3
VARS-222ENST00000470953 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
VARS-222ENST00000470953 CHGBP05060 677 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 ZNF286BP0CG31 522 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 PDE6AP16499 860 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 RASA1P20936 1047 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 MTHFRP42898 656 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 PSEN2P49810 448 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 ERVFC1P60507 584 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 PDE4BQ07343 736 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 ARHGAP1Q07960 439 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 TTF1Q15361 905 aaPredicted RBP6.92□□□□□ -1.3
VARS-222ENST00000470953 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 NAALADL2Q58DX5 795 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 SLC9C2Q5TAH2 1124 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 KANK3Q6NY19 840 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 RASGRP2Q7LDG7 609 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 CHST3Q7LGC8 479 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 SEPT8Q92599 483 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 EAF2Q96CJ1 260 aaPredicted RBP6.92□□□□□ -1.3
VARS-222ENST00000470953 MYL10Q9BUA6 226 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 BCO2Q9BYV7 579 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 LRRCC1Q9C099 1032 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 NYAP2Q9P242 653 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 RAD50Q92878 1312 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 ZNF532Q9HCE3 1301 aa6.92□□□□□ -1.3
VARS-222ENST00000470953 DNHD1Q96M86 4753 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms